| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5244 |
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| Symbol | trpA |
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| ID | 5750856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5812322 |
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| End bp | 5813131 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300369 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001566258 |
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| Protein GI | 160900676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.776632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA TCACCACGAC TTTCGCCAAA CTCCAGGAAG AAGGCCGCAA GGCCCTGATC
CCCTACATCA CCGCAGGCTT CCCGTTCGCG GCCATCACGC CGTCGCTGAT GCACGGCATG
GTGGAGGCTG GCGCCGACGT GATCGAGCTG GGCGTGCCCT TCTCGGACCC CATGGCCGAC
GGCCCCACCA TCCAGAAGGC AGGCGACCGC GCCATCGCCA ATGGCGTGGG CCTGGTGCAG
GTGCTGGCCT ATGTGCGCGA GTTCCGCCAG AAGAACCAGA CCACGCCCGT GGTGCTGATG
GGCTACGCCA ACCCGGTGGA GCGCTACGAC CAGATCCACG GCAAGGACCG CTTCGTGGAC
GATGCGGCCG AGGCCGGCGT CGACGGCCTG CTCATCGTGG ACTACCCGCC CGAGGAGTGC
GAGGCATTCG CCGCGCAACT GCGTGCGCGC GACATGGACC TCATCTTCCT GCTGGCGCCC
ACCTCCACCA CCGAGCGCAT GCAGCAGGTG GCGCGCGTGG CCAGCGGCTA TGTCTACTAC
GTCTCGCTCA AGGGCGTGAC CGGCTCGGGC GCGCTCGACA CGGCAGCCGT GGAAGCCATG
CTGCCGCGCA TCCGCGAGCA TGTGAGCATT CCCGTGGGCG TGGGCTTCGG CATCCGCGAC
GCGGCCACGG CACAGGCCAT ATCCCGCGTG GCCGATGCCG TGGTCATCGG CAGCCGCATC
ATCGAGATGC TGGACGGCCA GCCCCACGAA AAGATCGTCC CCCTGACCAT CGACTTCCTG
CGCGGCGTGC GCAAGGCACT CGACGCGTAG
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| Protein sequence | MSRITTTFAK LQEEGRKALI PYITAGFPFA AITPSLMHGM VEAGADVIEL GVPFSDPMAD
GPTIQKAGDR AIANGVGLVQ VLAYVREFRQ KNQTTPVVLM GYANPVERYD QIHGKDRFVD
DAAEAGVDGL LIVDYPPEEC EAFAAQLRAR DMDLIFLLAP TSTTERMQQV ARVASGYVYY
VSLKGVTGSG ALDTAAVEAM LPRIREHVSI PVGVGFGIRD AATAQAISRV ADAVVIGSRI
IEMLDGQPHE KIVPLTIDFL RGVRKALDA
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