| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5195 |
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| Symbol | |
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| ID | 5750807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5759406 |
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| End bp | 5760338 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641300320 |
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| Product | hypothetical protein |
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| Protein accession | YP_001566209 |
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| Protein GI | 160900627 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.859516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGC CCCGCATCAT GAAACCAAAC CTGCCGCACC TGCCGATACG GCCTCGCCGG
CATGCCTTTG CCCGTCCCCT GGCTCAGAAA GGCTTCACCC TGCTTGAGCT GATGGTGGGC
GTGGCCATCG GCCTGCTGGT CGTCGCCGTG GCCACGGCCG CGCTCATGGT GTCCCGTGGC
GTGTCCGGCA CGGTCAGCGA CGCCAGCGGC ATCCAGCAGC AAGCGGCCTA TGCCATGCGC
GTCATCGGCC TTCAGCTGCG CCAGGCGGGC TCCCTGTACC TGAACCTCGA TCCCAGAAAC
CAGAAGCCCG CGGCTGCCCT GGTGACCTCG ACACCCGTGG CGTTCGAGAC AACGGCTAAA
AGCGACTCCG GCCTGGAGTT TGACCCGTCG CTCAATACGG TCAGTGGAAC GGCCACGCCC
ACCACCCTGA CCGTCGGCTA TCGCCGCTAC AAGGAACTTG TCTACACAGA TGCCGCAGAG
CAGTCCCAGG CGCGCAACTG CGTGGGCGGG CCAGCCAACA GCAGTGCAGA CCAGCGCATA
GACAACGTCT TTCAGCTGAG CGGCAGCCAG TTGCAATGCA GTGGCAATGG CGCGGCCGCG
CAGACCTTGG TACAGAACGT GGCCGATTTC CAGGTCCGCT ATCTCATCCA GGACAACACC
AAGCCTGGCT CGCCGGGCAT CCAGTATGTT CCATCGGCCA ACGTCGATGC CTGGACGACA
GTGGAGTGGA GCAAGGTACG GGGCGTGGAA GTCTGCCTGG TCCTCTATGG CAATGAGCCC
ATCGATCTGC CGGCGGGCAG CAGCTATGTC GGCTGTGACG GCACATCCGT CAACATGACC
ACGCTCACCG GCCAGCGCAA CCGGCGCATG CACATTGCCT ATCGCAATGT CTTCCAACTG
CGCAGCCAGG GCCTGATCGG CTCCGTGCTC TGA
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| Protein sequence | MAAPRIMKPN LPHLPIRPRR HAFARPLAQK GFTLLELMVG VAIGLLVVAV ATAALMVSRG
VSGTVSDASG IQQQAAYAMR VIGLQLRQAG SLYLNLDPRN QKPAAALVTS TPVAFETTAK
SDSGLEFDPS LNTVSGTATP TTLTVGYRRY KELVYTDAAE QSQARNCVGG PANSSADQRI
DNVFQLSGSQ LQCSGNGAAA QTLVQNVADF QVRYLIQDNT KPGSPGIQYV PSANVDAWTT
VEWSKVRGVE VCLVLYGNEP IDLPAGSSYV GCDGTSVNMT TLTGQRNRRM HIAYRNVFQL
RSQGLIGSVL
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