Gene Daci_5116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5116 
Symbol 
ID5750727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5667564 
End bp5668562 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID641300240 
Producthypothetical protein 
Protein accessionYP_001566130 
Protein GI160900548 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.855195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT TCCTGCGCCG GCATGTGCTG GTGACTTCCA TGCTGGCGGC GACGGTCGCT 
GCTGCGGCCT TGCCGATGTC CGCGTCGGCC GCCGATGCCG CCTGGCCCAG CCGACCCATC
CGCGTGGTGG TTTCCTATCC GGCCGGTGGC GTCAGCGACG TGGTGGCGCG CGCCCTGGGC
GAGAAGCTGG CAGCCCGCCT GGGCCAGCCC GTGGTGGTGG ACAACAAGGC CGGCGCCGGC
GGCGCCATCG GCCTGGACCT GGTGGCCAAG GCCGCACCTG ATGGCTATAC GCTGGGCTTT
TCCTCCATCA GCCCGCTGAC GCTGAGCCCG CACCTGGGCA AGCCGCTGTT CGATCCGCAG
CGCGATCTCG TGCCCGTGAC CAGCGTGATG TATTCGCCCG TGCTGCTGCT GGGCACGGCG
CGCTCCACGG CGACCGACTT CAAGGCACTG GTGGCGCAGG CCAAGGCCCA GCCCGGCGAA
GTCCGCTGGG CCACGGCAGG CCTGGCATCG CTGGGCCACA TCATGCTCGA GCAGATCATG
TGCGCCTCGC AGGCCAAGAT CACGCACATC CCCTACAAGG GCGGCGGCCA GCAGCTCAAT
GATGGCCTGA GCGCCCAGTT CGAGGTGCTC TCCACCAACG CCGGGCCGGC CGTGCTGCAG
CACATCAAGG CGGGCAAGTT CAAGGCCCTG GCCGTGGGCG CCCCCCAGCG CCTGGAGTCG
CTGCCCGGCG TGCCCACGCT GGCCGAGCTG GGCTACAAGA GCGCCAACAT GACCTCGGTG
TTCGGCATCT TCGCGCCCGC AGGAACGCCT GCGCCCGTGC TGCAAAGGCT CAATGCCGAG
ATCAACCAGG TGCTGACCCA GCCCGACATG CGAGCCAAGC TGGAGGCCAC CGACAACGTG
GCCACGGGCG GCAAGGCCGA GGATTTCGCG CGCCAGATCG AGGCCGAGTC CCAGTCCAAC
GCGCGCATCA TCCAGGCTGC AGGCATCAAG CTGAACTGA
 
Protein sequence
MTDFLRRHVL VTSMLAATVA AAALPMSASA ADAAWPSRPI RVVVSYPAGG VSDVVARALG 
EKLAARLGQP VVVDNKAGAG GAIGLDLVAK AAPDGYTLGF SSISPLTLSP HLGKPLFDPQ
RDLVPVTSVM YSPVLLLGTA RSTATDFKAL VAQAKAQPGE VRWATAGLAS LGHIMLEQIM
CASQAKITHI PYKGGGQQLN DGLSAQFEVL STNAGPAVLQ HIKAGKFKAL AVGAPQRLES
LPGVPTLAEL GYKSANMTSV FGIFAPAGTP APVLQRLNAE INQVLTQPDM RAKLEATDNV
ATGGKAEDFA RQIEAESQSN ARIIQAAGIK LN