| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5088 |
|---|
| Symbol | |
|---|
| ID | 5750699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5641533 |
|---|
| End bp | 5642171 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300212 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001566102 |
|---|
| Protein GI | 160900520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00483087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGG AGCGGCGAAG GCCCGGCGGC ACAATGTCGG CCGCTTTCAC TTTATTTCCA
AATTTGCACA TGCACGCAGC CACGCCGCCC TCGCCCTGGA TCCAACGCTG GTCGCACCTT
CTGGCACCCC AGGCCTCGGT GCTTGACGTG GCCTGCGGCC CCGGCCGGCA CATGCGCTGG
TTCCAAGCGC GTGGCCACGC CGTCACCGGC GTGGACCGCG ACGCCCAGGC CCTGGCCGGC
CTGCAGGGCG TGGGCGAGCT GCTGTGCGCC GACATCGAAA ACGGCCCCTG GCCCCTGCCC
GGCCGGCAGT TCGGCGCCGT GGTCGTGACC CACTATCTGT GGCGCCCGCT GTGGCCGGCA
CTGCTGGACA GCGTGGCCCC CGGCGGCGTG CTGCTGTACG AAACCTTTGC CCAGGGCAAT
GAGGCTTTCG GCAAGCCTTC CCGCCCCGAT TTCCTGCTGG CGCCCGGCGA GCTGCTGCAG
GCCTGCACGG GCTGGCACAT CGTGGCCTAC GAGCACGGCC AGCTGGGCGA GCCCGATCGC
ATGGTCCAGC GCATTGCGGC ACTGCGCCCC GATGCAACAG GCCGGGAACC CGTGGCCATG
CTGGCGCATC AGAAGGCGTC AGGCTCTGCA ATCGCCTGA
|
|---|
| Protein sequence | MEAERRRPGG TMSAAFTLFP NLHMHAATPP SPWIQRWSHL LAPQASVLDV ACGPGRHMRW
FQARGHAVTG VDRDAQALAG LQGVGELLCA DIENGPWPLP GRQFGAVVVT HYLWRPLWPA
LLDSVAPGGV LLYETFAQGN EAFGKPSRPD FLLAPGELLQ ACTGWHIVAY EHGQLGEPDR
MVQRIAALRP DATGREPVAM LAHQKASGSA IA
|
|---|
| |