Gene Daci_5055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5055 
Symbol 
ID5750666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5602539 
End bp5603357 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID641300179 
Producthypothetical protein 
Protein accessionYP_001566069 
Protein GI160900487 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.171141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCA AGACCCGCTT TGCCGTCCGT CTGGCTGCCA GCCTCGCCAT TGCCTGCGGC 
GCCTTCCAGG CCGCCCAGGC CCACAACCTG TGGCTGCTGC CCTCGACCAC GGTGCTGTCC
AAGGCCGAAT GGATCACGGT GGATGCCGCT GTCTCCAACG ACCTGTTCTT CTTCAACCAC
GTGCCGCTGG GCCTGGACAA CCTCGTTGTC TCGGCGCCGG ACGGCTCGGC CGTCGCGCCG
CAGAATGCCC ATCGCGGCAA GCTGCGCAGC GTGTTCGACC TGGACCTGCA GCAAAGCGGC
ACCTACCGCC TGGCCATCGT CAACGACGGC CTGTTTGCCT CCTGGAAGGA CAAGGCCACG
GGCCAGAACC GCCGCTGGCG CGGCTCGCCC GAGAAGTTCG CCGCCGATGT GCCCGCCGAC
GCGCAGGACC TGAAGGTGAC CCAGTCCGTG GGCCGCATCG AGACCTTCGT GACCGTGGGC
AAGCCCAGCG CCGTCAAGCC TTCCGGCAAG GGGCTGGAGC TGGTGCCCGT GACCCATCCC
AACGACCTGG TCAAGGGCGA GAAGGCCACC TTCGCCTTCC ATGTGGACGG CAAGCCCGCC
GCCAACCTGG AAGTCGTGCT GGTGCCCGGC GCCACGCGCT ACCGCGACAA CAAGGGCGAG
ATCAAGGCCA CGACCGACGC CAAGGGCGAG TTCAGCGTGA CCTGGCCCAC CGCCGGCATG
TACTGGGTGG ATGCCGACGC GCAGGACAGC AAGACATCGC TGCCCCAGGC CAAGGAGCGC
CGCCTGTCCT ACGTGGGCAC GTTCGAGGTG CTGCCCTGA
 
Protein sequence
MKSKTRFAVR LAASLAIACG AFQAAQAHNL WLLPSTTVLS KAEWITVDAA VSNDLFFFNH 
VPLGLDNLVV SAPDGSAVAP QNAHRGKLRS VFDLDLQQSG TYRLAIVNDG LFASWKDKAT
GQNRRWRGSP EKFAADVPAD AQDLKVTQSV GRIETFVTVG KPSAVKPSGK GLELVPVTHP
NDLVKGEKAT FAFHVDGKPA ANLEVVLVPG ATRYRDNKGE IKATTDAKGE FSVTWPTAGM
YWVDADAQDS KTSLPQAKER RLSYVGTFEV LP