Gene Daci_5053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5053 
Symbol 
ID5750664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5599990 
End bp5601375 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content71% 
IMG OID641300177 
Productflavodoxin/nitric oxide synthase 
Protein accessionYP_001566067 
Protein GI160900485 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.183629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.101243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGT CCGAAACCGG GCTGCGCGTA CTCGCGGCCG CCGTGCTGGT CCTGCTCTAT 
GCGGCCATGT GCGCCGCCAT TTGGTGGCGC GAGCGCCGCC AGCGCATGCG GGCCCGGCAG
GAAGCGGCTG CGCTGACCAG CGCACGCGAG GGCGCGCTGC CCCTGCTTGT GGCCTATGCC
AGCCAGACCG GCCAGGCCGA GGAACTGGCG CGCGAAACCG CCCGGCTGCT GCACACGGCC
GGAGAAAGCG TGCACCTGTG CGCCCTGGAC GCTGTGGATG CCGACCTGCT GGCGCGCACG
CAAAGGGCGC TGTTCATCGC CAGCACCTAT GGCGAGGGCG ACCCGCCCGA CAACGCGGCG
CTGTTCCTGG CGCATGCCAT GGCGCAGGCG CAGGACCTGT CCCATCTGCA ATACGGCCTG
CTGGCGCTGG GCGACCGGCA GTATGCGCAG TTCTGCGGCT ATGGCCGCGC GCTGGACAGC
TGGCTGCGTG CCGGTGGCGC CAGGCCCTGG TTCGAGCGCA TTGAAATGGA CAACGGCGCG
CCGCAGGCGC TGACCGCCTG GCAGCACCAG CTGACCCAGA TCAGCAGCCT GGGCGACATG
CCGGCATGGG AGCAGCCGGT CTTCAGCGAA TGGACGCTGG CCGCGCGCCG GCACATGAAC
CCGCGCAGCG CAGGCGAGCC GGTGTTCCAC ATCGAGCTGC AGCCCCCTGC AACGGAGCCG
GCGCTGTGGG AGTCCGGCGA CCTGGCGCAG GTCTGCATTC CTGCGGACCC GCAGCATCCG
CGCGAGTACT CCATCGCCTC CATCGCCCAG GATGGCTGCG TGCACCTGCT GGTGCGCCAG
GCGCGGCGCG AGGATGGCTC GCCGGGCCTG GCCTCGGGCT GGCTCACGCA GGGCGCGCCC
CTGGGTGCAG CCATCACCCT GAGGCTGCGT GCGCACCGCA ATTTCCGGCT GGAAGACAAC
CTGCAGCGCC CGCTGGTGCT GATCGGCAAC GGCACGGGCC TGGCCGGCCT GCGCAGCCAC
CTGCGCGCGC GTGCTGCGGC GGGCCTGGGT CCCAACTGGC TGCTGTTCGG CGAGCGCAAT
GCGGCGCACG ACCGGCTGTA CGGCGACGAG CTTCAGGCAT GGTGCGATGG TGGCGTGCTG
CAGCGCCTGG ACCTGGCCTT CTCGCGCGAC CGCAGCGAAG GCGCGCCGCG CGCCTATGTG
CAGGACCTGC TGGCGCAGTC CGGCGATGTC TTGCGCCAAT GGGTGGCGCA GGGCGCAGCC
ATCTACGTGT GCGGCAGCCT GCAGGGCATG GCCCAGGGCG TGGACCAGGC GCTGCACGCC
GTGCTGGGCG AGGCGCAGAT GGAGCTGCTG GTGTGCAGCG GCCGATACCG GCGCGATGTG
TACTGA
 
Protein sequence
MTLSETGLRV LAAAVLVLLY AAMCAAIWWR ERRQRMRARQ EAAALTSARE GALPLLVAYA 
SQTGQAEELA RETARLLHTA GESVHLCALD AVDADLLART QRALFIASTY GEGDPPDNAA
LFLAHAMAQA QDLSHLQYGL LALGDRQYAQ FCGYGRALDS WLRAGGARPW FERIEMDNGA
PQALTAWQHQ LTQISSLGDM PAWEQPVFSE WTLAARRHMN PRSAGEPVFH IELQPPATEP
ALWESGDLAQ VCIPADPQHP REYSIASIAQ DGCVHLLVRQ ARREDGSPGL ASGWLTQGAP
LGAAITLRLR AHRNFRLEDN LQRPLVLIGN GTGLAGLRSH LRARAAAGLG PNWLLFGERN
AAHDRLYGDE LQAWCDGGVL QRLDLAFSRD RSEGAPRAYV QDLLAQSGDV LRQWVAQGAA
IYVCGSLQGM AQGVDQALHA VLGEAQMELL VCSGRYRRDV Y