Gene Daci_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5020 
Symbol 
ID5750631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5557629 
End bp5558660 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID641300144 
Producthypothetical protein 
Protein accessionYP_001566034 
Protein GI160900452 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.86222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG TGTTGGCGGT GCATGACGAA GCAGGTACGC AAGGCGAGAA CGCACAAACT 
TCCATGACGG CGGGCACGCT GCTGCGCCAG GCGCGCGAGG CGGCGGGTCT GTCTCTGGCC
GGGCTGGCGG CGGCACTCAA GGTGCCAGCC CCCAAGCTGG AGGCGCTGGA GGCGGATGAC
TACGCCGCAT TCCAGGACCA TGTCTTCATG CGGGCCCTGG CGCAAAGCGT CTGCCGCACG
CTGCGCATGG ACTCTGCATC GGTGCTGGCC CTGCTGCCGC GCACCCAGCT CAAGAGCCTG
GCCGATGATC GCGGCAGCAT CAACGCCACG TTCAAGGAGC GCTCCTTCAA GGCCACAGGA
ACATCGCTGG GACGTGAAAA CGGCTCGCGC AAGGTGGCCA TCATCGTGCT GCTGCTGCTG
GCCGCTGCCG CTGCCGTCTA CTTCCTGCCC AAGCATGAAG GCGACGCCGA AGAGCCGCAG
GCCGGCGCTT CCGATGCCGC TGCCCTGGTG CAGCCTGCAG GGACTGTGTC CGAGCCCGTG
GCCGCCCAGG AGCCCGTTGC GCCTGCGGCG ACGACGCCGG CCGATGTGCC GGCTGCACCT
GCATCTGCAT CTGCATCTGC ATCTGCATCT GCATCTGCAT CTGCACCGGC AACTTCAGCG
CCTGCGGCGG CAGCCGTTCC GGCTCCTGCG TCCACCACAA CGCCTGCTGC CCCTGCTGCT
GCAACAGTCC CTGCCGCCAA TGCGCCTGCC GATGGCGCCG CAGCGACATC GGCAGCCACT
GCGGCGCAAA CGCCTGGTGG CGTGCTGGTC ATGAAGGCCA ACGCACAATC GTGGGTACAG
GTCAAGGATT CCAGCGGCCG CGTGGTGCTG CAAAAGACGC TGGCGGCCGG TGAATCCATT
GGCGCCGAGG GCGCACTGCC GCTGTCGGTC ATCGTCGGCA ATGCCAGCGG CACCGAGGTG
CGTGTGCGTG GCGAATTGCT GGAAGTCGCC AAGACCACCC GCGACAATGT GGCCCGCTTT
GAGGTGAAGT GA
 
Protein sequence
MSEVLAVHDE AGTQGENAQT SMTAGTLLRQ AREAAGLSLA GLAAALKVPA PKLEALEADD 
YAAFQDHVFM RALAQSVCRT LRMDSASVLA LLPRTQLKSL ADDRGSINAT FKERSFKATG
TSLGRENGSR KVAIIVLLLL AAAAAVYFLP KHEGDAEEPQ AGASDAAALV QPAGTVSEPV
AAQEPVAPAA TTPADVPAAP ASASASASAS ASASAPATSA PAAAAVPAPA STTTPAAPAA
ATVPAANAPA DGAAATSAAT AAQTPGGVLV MKANAQSWVQ VKDSSGRVVL QKTLAAGESI
GAEGALPLSV IVGNASGTEV RVRGELLEVA KTTRDNVARF EVK