Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5012 |
Symbol | |
ID | 5750623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5548508 |
End bp | 5549902 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641300136 |
Product | HflK protein |
Protein accession | YP_001566026 |
Protein GI | 160900444 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.967957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTTT CACAACGCGC CCATCGCTGG GCGATGCTGC CGCAGCGCCT TCGCGGGATG TTCAACCTGA ATGATCCGCG ATGGGGACGT GGCGACGACA AGAACGACGA TGCTTCGCGC CCCGATGCCG ACCGTCCCGC GCCGCCGCCC CCGCCTGCGG AACCTGCACG CGACAACCGC GACAGCCGTG ACAACCGCCC CTCGTCGGGC GGCGGCCAGC CGCCTGATCT GGATGAGCTG TGGCGCGACC TCAACCGCAA GCTCTCGGGC CTGTTCGGCG GCAAGCCGGG CGGCGGCCGT GGCCAGCCGC CCATCCGCAA TGGCGGCGGC AGCCAGCCGC CGGACATGCG CAGCGCCGGC ATGGGCGTGG GCCTGATCGC CGGCATTGCC TTCATCATCT GGATGGGCAC GGGCATCTTC ATCGTCCAGG AAGGCCAGCA GGCCGTCATC ACCCAGTTCG GCAAGTACAA GAGCACGGTG GGCGCCGGCA TCAACTGGCG GCTGCCGTAC CCGATCCAGC GCCATGAACT GGTCTTCGTG ACGCAGATCC GCTCGGCCGA CGTGGGGCGC GACACCATCA TCAAGAGCAC GGGCCTGCGC GAGTCGGCCA TGCTCACCGA GGACGAGAAC ATCGTCGAGA TCAAGTTCGC CGTCCAGTAC CGCCTGAGCG ACGCGCGCGC CTGGCTCTTC GAGAGCAAGA ACCCGTCCGA GGCCGTGGTC CAGGCCGCAG AGACTGCCGT GCGCGAAGTC GTCGGCAAGA TGAAGATGGA CACGGCGCTG GCCGAGGAGC GCGACCAGAT CGCCCCGCGC GTGCGCGACC TGATGCAGAC CATCCTGGAC CGCTACAAGG TGGGCGTGGA AGTCGTGGGC ATCAACCTGC AGCAAGGCGG CGTGCGTCCG CCCGAGCAGG TCCAGGCGGC CTTCGACGAC GTGCTGCGTG CCGGCCAGGA GCGTGAGCGT GCGAAGAACG AAGCGCAGGC CTACGCCAAC GACGTGGTGC CGCGCGCAGC CGGCTCGGCA GCGCGCCTGC TGGAAGAGTC CAACGGCTAC AAGGCCCGCA TCGTGGCTCA GGCCCAGGGT GATGCGCAGC GCTTCAGCTC GGTGTTCACC GAGTACCAGA AGGCTCCCCA GGTCACGCGC GACCGCATGT ACCTGGAAAC CATGCAGCAA ATCTACGGCA ACGTGACCAA GGTGCTGGTG GAATCGCGCC AGGGCTCCAA CCTGCTGTAC CTGCCGCTGG ACAAGATCAT GCAAGGCGTG AGCGGCAATG TGCCGGCAGC CGACAGCTCG GCGGCCCCCA GCACCCAGGC GCCTGCGCCT GCCGCCATTC CCGGCCTTTC GAACGATGCG CGCAGCCGCG ACAGCAGTCG CAGCCGTGAC CGCGAAGCAC GCTGA
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Protein sequence | MNLSQRAHRW AMLPQRLRGM FNLNDPRWGR GDDKNDDASR PDADRPAPPP PPAEPARDNR DSRDNRPSSG GGQPPDLDEL WRDLNRKLSG LFGGKPGGGR GQPPIRNGGG SQPPDMRSAG MGVGLIAGIA FIIWMGTGIF IVQEGQQAVI TQFGKYKSTV GAGINWRLPY PIQRHELVFV TQIRSADVGR DTIIKSTGLR ESAMLTEDEN IVEIKFAVQY RLSDARAWLF ESKNPSEAVV QAAETAVREV VGKMKMDTAL AEERDQIAPR VRDLMQTILD RYKVGVEVVG INLQQGGVRP PEQVQAAFDD VLRAGQERER AKNEAQAYAN DVVPRAAGSA ARLLEESNGY KARIVAQAQG DAQRFSSVFT EYQKAPQVTR DRMYLETMQQ IYGNVTKVLV ESRQGSNLLY LPLDKIMQGV SGNVPAADSS AAPSTQAPAP AAIPGLSNDA RSRDSSRSRD REAR
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