Gene Daci_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5005 
Symbol 
ID5750616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5541019 
End bp5541999 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID641300129 
Productfatty acid hydroxylase 
Protein accessionYP_001566019 
Protein GI160900437 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTGGT GGATTCAGTG GTTCGGTAAT GCGCAGCAGC GCCTGTTCGA GGGCGTTGTC 
CAGCCCCTGC TGTTCGGCCT GGGGCAGGCC AGCCTGCTGG AGGACGCCTA TGGCGCCACG
GGCTGGCTGC TGGTGGGTCT GCTGCAGATC TTCATCATGG TGGCGGTGAT CGCGCCGCTG
CAGTACTGGC GGCCCGTCGA GCCCGTTACC GACCGGCGCG CCATCCACGT GGACATCATC
TACACCGTGG TTCACCGGCT GGGCCTGTTC CGGCTGGCCC TGTTCTTCAC GCTGGACCCG
CTGTGGGACG AGCTCATGGG CCGTCTGCAT GTCTGGGGGC TGCCGAGCTT TCACCTCGAC
GGCGTGTGGC CCGGCGTCAC CGACCTGGCC TGGGTCAGCC TGATCATCTA CCTGCTGGCC
TTCGACTTCC TGGACTACTG GATACACCGC GGCCAGCACA GCATCGGCTG GTGGTGGAAG
CTGCATGCGC TGCACCACTC GCAGCGCCAG ATGACGGTGT GGAGCGACAA CCGCAACCAC
CTGCTCGACG ATGTGATCCG CGACACCATC ATCGTGCTCG TGGCCCAGCT CATCGGCGTG
GCGCCAGGCC AGTTCGTGGC CATCGTGGCC TTCACCCAGC TCAGCGAGAG CTTCCAGCAC
GCCAACCTGC GCGTCTGGTT CGGCACCATC GGCGAGCGGC TGTGGATCAG CCCCCGTTTT
CACCGCCGCC ACCACGCCAT CGGCATTGGC CATGAGCCCA TGGCGCCCGT GCGCAACAAG
AAGGCGCATG GCAACAACTT CGGCGTGCTC CTGCCCTGGT GGGACATGCT GTTCGGCACC
GCCAACTTCG AGCTGCGCTT CGATCCCACC GGCGTGCGCG ACCAGGTCCA GCCCAATGCC
CAGGGCCAGC TGCGCGACTA CGGCCAGGGC TTTTGGGCCC AGCAATGGCG TGGGTTCCTA
AGGTTGATGG GTCGCGCTTG A
 
Protein sequence
MDWWIQWFGN AQQRLFEGVV QPLLFGLGQA SLLEDAYGAT GWLLVGLLQI FIMVAVIAPL 
QYWRPVEPVT DRRAIHVDII YTVVHRLGLF RLALFFTLDP LWDELMGRLH VWGLPSFHLD
GVWPGVTDLA WVSLIIYLLA FDFLDYWIHR GQHSIGWWWK LHALHHSQRQ MTVWSDNRNH
LLDDVIRDTI IVLVAQLIGV APGQFVAIVA FTQLSESFQH ANLRVWFGTI GERLWISPRF
HRRHHAIGIG HEPMAPVRNK KAHGNNFGVL LPWWDMLFGT ANFELRFDPT GVRDQVQPNA
QGQLRDYGQG FWAQQWRGFL RLMGRA