Gene Daci_4992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4992 
Symbol 
ID5750603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5526817 
End bp5527818 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID641300116 
Producthypothetical protein 
Protein accessionYP_001566006 
Protein GI160900424 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0110205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CAAGCGCAGG CCGCAAAGCC GCCATGCTCG CTGCGGCCAT CTCCGCCTCG 
GTGGCAGGCA CGGCGCCCGT CGCCGCCATC GCGCAGGATG GCTTTCCCCA GCCAGGGCGC
CAGTTGCGCA TCATCGTGCC GTTCACTGCA GGCGGCAGCT CTGACGTGCA GGCACGCATG
CTGGCCGACC GCCTGAGCCG GCTCTGGGGC CAGCCGGTGG TGGTGGAAAA CAAACCTGGC
GCGGGCGGTC ATCTGGGAGG CCGATATGTG GCCGATCAGC CGGCCGACGG CTACACGCTG
ATGGTGGGCT CCATCGGCCT GCATGCCGCC TATGGCGTAT ACGGCAAGCT GGCCTATGAC
CCCGCAAGGG ATCTGCGCGT GGTGACCGTG CTGGCCGAGA TGCCGCATGT GGTGGTGGCC
ACGCCCGGCC TTGCCGCCAG CAACCTGGCC GAGCTGACGG CGCTGGCCAA AAAGGCGCCT
GGCACGGTCA ACTTCGGCTC GGCCGGCGTG GGCTCGTCCG TGCACATGAT GGGCGAGCTG
TACAAGCTGC AGGCGGGCGC GCCCATCGTG CACGTGCCTT ATCGCGGCAG CTCGGCCGCG
CTCAACGACC TGCTGGGCGG CCAGATCCAG CTCATGTTCG AGAACCCGCC CACGGTGCTG
TCGCACATAC GCGGCGGCAA GCTCAAGGCG TTGGCCGTCA CGGGCAGCCA GCGACTGCCG
GCCCTGCCGG ACGTGCCCAC GGCGGCCGAG TCCGGGCTCA AGGACTACGT GGCCACCTCC
TGGACCACGG TGGCCGTCTC CTCCAAGGTG CCCGAGGCCA TCGTCAAAAA GCTCAACGAC
GACATCCGAA AGGTCGTGGC CACGCCCGAG TTCCGCAAGG GCCTGCAAGA GCAGGGCATG
AGCGCCGTCG CCAACAGCCT GCCTGAGGCG CAATCCTTCG TTGCCCGCGA AAAGCAGCGT
TGGGACCGCG TGATCGCCGA AGGCCACATC TCCGCCCAAT GA
 
Protein sequence
MIKTSAGRKA AMLAAAISAS VAGTAPVAAI AQDGFPQPGR QLRIIVPFTA GGSSDVQARM 
LADRLSRLWG QPVVVENKPG AGGHLGGRYV ADQPADGYTL MVGSIGLHAA YGVYGKLAYD
PARDLRVVTV LAEMPHVVVA TPGLAASNLA ELTALAKKAP GTVNFGSAGV GSSVHMMGEL
YKLQAGAPIV HVPYRGSSAA LNDLLGGQIQ LMFENPPTVL SHIRGGKLKA LAVTGSQRLP
ALPDVPTAAE SGLKDYVATS WTTVAVSSKV PEAIVKKLND DIRKVVATPE FRKGLQEQGM
SAVANSLPEA QSFVAREKQR WDRVIAEGHI SAQ