Gene Daci_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4980 
Symbol 
ID5750591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5513719 
End bp5514684 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID641300104 
Producthypothetical protein 
Protein accessionYP_001565994 
Protein GI160900412 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.790818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC GCCCCCTGCT GCTGGCCGCA GCTGCCCTGC TGCCCGCCAT CGCCCTGGCC 
CAAACCCCGC CGGACTGGCC CACGCGGCCC GTGCGCATGC TTGTGGGCTC GGCCCCCGGC
GGCGGCACCG ACGCCATGGC ACGCGCCGTG GCCGACCGGC TGGCGCCGCT GCTGCGCCAG
CCGGTGATCG TGGAAAACCG CCCCGGCGTC TCCAACACCC TGGCCGTGGA CATGACGGCC
AAGTCCACGG ACGGGCACAC CATGGTGATG GGCGTCGTCA CGGCCCATGC CATTGCCCCG
CACCTGCTCA AGCTGGGCTA CGACAGCAAC CGCGACCTGG TGCCGGTGGC CTATGTGGGC
GCAGTGCCCA ATGTGCTGGT GGTGGGAAAC AACCTGCCCG CCAACTCGGT GCAGGAACTG
GTCGCCCTGG CCCGCAAGGA GCCCGGCAGG ATCAACTTCG CCAGCAGCGG CACGGGCAGC
ACCCAGCACA TCGCGGCCGA GATGTTCAAG GACGCGGCCG GCATTGAACT GACCCACGTG
CCCTACAAGG GCAGCGCCGC CGCCCTGGTG GACCTGGTCA GCGGCCAGGT GCAGATGAGC
TTCGACACCA TGCCTTCGGT GATCGGCCAG ATCAAGGCCG GCAAGCTGCG CGCCCTGGGC
GTGACATCGC CCCGGCGCAA CGCCCAGCTG CCCCAGGTGC CCACGCTGGC CGAGGCCGGC
CTGCCCGGCG TGGAGATAGG CGCCTGGTAC GGCATCTACA TGCCAGCGGC CACACCCCGC
GCCGTGCAGG CCCGGGTGCA CGACGAGGTC AACAAGGTGC TGGCCATGCC CGAGACGCGC
ACGCGCCTGG AGGCCGTGGG CGCCGAGCTG CAGCCCATGG GCCAGGCGGA GTTCATCGCC
TTGCACAACG CCGAGTACCA GCGCTTTGGC GAAATCATCC GCAAGAACCA CATCAAGATC
GACTGA
 
Protein sequence
MQRRPLLLAA AALLPAIALA QTPPDWPTRP VRMLVGSAPG GGTDAMARAV ADRLAPLLRQ 
PVIVENRPGV SNTLAVDMTA KSTDGHTMVM GVVTAHAIAP HLLKLGYDSN RDLVPVAYVG
AVPNVLVVGN NLPANSVQEL VALARKEPGR INFASSGTGS TQHIAAEMFK DAAGIELTHV
PYKGSAAALV DLVSGQVQMS FDTMPSVIGQ IKAGKLRALG VTSPRRNAQL PQVPTLAEAG
LPGVEIGAWY GIYMPAATPR AVQARVHDEV NKVLAMPETR TRLEAVGAEL QPMGQAEFIA
LHNAEYQRFG EIIRKNHIKI D