| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4954 |
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| Symbol | |
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| ID | 5750565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5484320 |
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| End bp | 5485231 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300078 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001565968 |
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| Protein GI | 160900386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGT CAGGAAAATT TTTCGCCGCC GCGCGAACGT TCGCCATCGA TGTGGCCAAC
GGTTTTCTTG CCATCATCCA CAACAGCTTC GCCCTGCTGG GCCTTGCTGT GGCCTTCATG
GCCATCACCT TGTTCGCCCG CCCTGACCTG CGCGATGCCG GAGAGAGCCA GCTGCGCTCC
TGGCTGACCG CTCGCCAGAT GGCCGAGCTG GGTGTTCCCG TCGAACTCGC TGCCAGCGAT
CGGGCGACGG CGACCAACCC CAAGAACCTG CCCAAGGAGC AGGCAGCCGT GGCCTTCTGG
CTCAGCAAGA AGTACCGCGT GGCGCCTGAG CCGATCGCGG CACTGGTCAG CGAGGCCTAT
GACCTGGGCA AGGTCAACCG CCTGGACCCG ACGCTGATCC TGGCCATCAT GGCCATCGAG
TCCAGCTTCA ACCCGTTTGC GCAAAGCGCT GTCGGCGCGC AGGGCCTGAT GCAGGTGATG
ACCACGGTGC ATACCGACAA GTATGAGAAC TTCGGTGGCC AGAATGCTGC CTTCGACCCG
GTCAGCAATC TGCGCGTGGG CGTGCGCGTG CTCAAGGAAT GCATCGAGCG CGCCGGCTCC
ATCGAAGGAG GCCTGCGCTA CTATGTGGGC GCGGCCAACC TGCCCACCGA TGGTGGCTAC
GCCGCCAAGG TGCTGGCCGA GCACCAGCGC CTGCGCATGG CCGCCGGCCT GCGTGCCGTG
CCTTTGATGA CCGCCAAGGT CGATCAGCCC CGGCAGGCTG TACAGGTTGC CTCCACCAAG
CCGGCCACCC CCGTGGCCGA GGCCTCGGGC CCGGCAGCAG CGGCTGCGCC TGCAGCCGTG
CCGGTCAGCT CGAGCAACAC CTCTGCCCGC TCCGAGCAGG TGGCCCTTCA GTCCCAGGAG
CCGGCGCTGT AG
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| Protein sequence | MPASGKFFAA ARTFAIDVAN GFLAIIHNSF ALLGLAVAFM AITLFARPDL RDAGESQLRS
WLTARQMAEL GVPVELAASD RATATNPKNL PKEQAAVAFW LSKKYRVAPE PIAALVSEAY
DLGKVNRLDP TLILAIMAIE SSFNPFAQSA VGAQGLMQVM TTVHTDKYEN FGGQNAAFDP
VSNLRVGVRV LKECIERAGS IEGGLRYYVG AANLPTDGGY AAKVLAEHQR LRMAAGLRAV
PLMTAKVDQP RQAVQVASTK PATPVAEASG PAAAAAPAAV PVSSSNTSAR SEQVALQSQE
PAL
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