Gene Daci_4891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4891 
Symbol 
ID5750497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5404496 
End bp5405317 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID641300010 
Producttaurine dioxygenase 
Protein accessionYP_001565905 
Protein GI160900323 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.440182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCG AACACATCAC CCCGTGCATA GGATCGGAGA TATACGGCAT CGATCTCTCG 
GACCCGGCGC AGGTGCATGA CCATGCGGAC GCGCTGCGCC GGCTGCTGGC CGAGCGCCAG
GTCATCTTCT TCCGCGACCA GACGCTGGAC CCTGCGCAGC AGGTGCGCGT GGCCCAGGTG
TTCGGCAAGG TAGAGCCCGT GTCCTCCACC TTTCCCTCGC ACCCGGACGA TCCCCATGTC
GAGCTGCTGA TCAGCCAGGG CACGCGCACC GGCACCGACA TCTGGCATGC CGACCTGACC
TGGCAGACCA AGCCGCCCGC CGGTGCCTGC CTCTACGCCG TGGACGTGCC GCCCACGGGC
GGCGACACCA TGTGGGCCAG CATGACCACG GCCTTCGCCT CGCTGGCGCC CGAGCTGCAG
GCCTATCTGC GCAAGCTGCG CGCCACCCAC AACTGGGAGG CGCCAGCGCT CAGGCAAAGC
CTGATGCGCC GAGATCCGTC TGGCGAGGCC TATCGCGCCA CCCGCCTCAA GCATCCGCCG
CTGGAGCAGC CCGTGGTCCT GGAGCACCCG GTCACCGGGC TGCCCGTGGC CTTTGTGAAC
TCGCTCTACA CCACGCACAT AGAAGGCGTG ACCAGCGACG AGAGCGCGGC CCTGATCGCC
ATGCTCAGCG GCCTGGCCAA GGTGCCTGAA TGGCAGGTGC GCTTTCGCTG GCGCAAGGGC
TCGGTGGCCA TCTGGGACAA CCTGGCCACG CAGCACTACG CGGTCAATGA CTACCACCCC
GCAGCGCGGC GGATGCACCG TGTGGCGATA CGCCAGGCTT GA
 
Protein sequence
MQVEHITPCI GSEIYGIDLS DPAQVHDHAD ALRRLLAERQ VIFFRDQTLD PAQQVRVAQV 
FGKVEPVSST FPSHPDDPHV ELLISQGTRT GTDIWHADLT WQTKPPAGAC LYAVDVPPTG
GDTMWASMTT AFASLAPELQ AYLRKLRATH NWEAPALRQS LMRRDPSGEA YRATRLKHPP
LEQPVVLEHP VTGLPVAFVN SLYTTHIEGV TSDESAALIA MLSGLAKVPE WQVRFRWRKG
SVAIWDNLAT QHYAVNDYHP AARRMHRVAI RQA