Gene Daci_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4888 
Symbol 
ID5750494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5402301 
End bp5402633 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content71% 
IMG OID641300007 
Productthioredoxin domain-containing protein 
Protein accessionYP_001565902 
Protein GI160900320 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCC AGTCCAAGCA CCTGACCGAC GCCCCCGATC GCAGCACCGT CGACACGCTG 
CCCGGCGCTA CCTTGCTGGA GTTCGGCACC GCCTGGTGCG GCCACTGCCA GGGCGCGCAA
CCGCTGATTG CCCAGGCGCT GGAGGCCGCC CCGCAGGTGG CCCACATCAA AGTGGAAGAC
GGCCCCGGCC GGGCCCTGGG TCGCAGCTAC CGCGTCAAGC TCTGGCCCAC CCTGATCTTT
CTGCGTGACG GGCAGGAGGT GCAAAGGCTG GTGCGGCCCC AGCAGGCCCG CGAGATCGCG
GACGCGCTGG CCCGCATCAC CGCCCAGCCC TGA
 
Protein sequence
MPFQSKHLTD APDRSTVDTL PGATLLEFGT AWCGHCQGAQ PLIAQALEAA PQVAHIKVED 
GPGRALGRSY RVKLWPTLIF LRDGQEVQRL VRPQQAREIA DALARITAQP