| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4876 |
|---|
| Symbol | |
|---|
| ID | 5750482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5388236 |
|---|
| End bp | 5389459 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641299995 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565890 |
|---|
| Protein GI | 160900308 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.239884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA CCGCAATTAT CACCCGCGTG CTGGACAGCG TGCAGCAGCT CGATGCCCAG
GCCTGGAATG CGCTGCTGGC ATCGCAGGCC GCGCCCACTC CCTTCATGCG CCACGAGTAC
CTGAGCGCGC TGGAATCCAG CGGCAGCGCC GTGCCGCAAA CCGGCTGGGC CGGCCGCGTG
GTCACGCTCT GGCAGGGCGG CGAGCTGGTC GCCGCCTGCC CGGTCTACGC CAAGGCGCAC
TCCTATGGCG AGTACGTGTT CGACTTTGCC TGGGCACGTG CCTACGCCCA GCATGGGCTG
GACTACTACC CCAAGGGCGT GCTGGCCGTG CCTTTCACGC CCGTGCCGGG CAGCCGCCTG
CTGGCGCGCA CGCCCTTGCT GCGTGCAGCC CTGGTGCGCG CGGTGCGCGA ATGGGCCCAG
GCGCAGCAGT TGTCTTCGCT GCACCTGCTG TTCAGCGATG CCGAGGATCT GGCCGCCTGC
GATGCCGACG GCTGGATGCA GCGCAGCACC GTGCAGTTCC ACTGGAGCAA CCAGGGCGCC
GATGGCGCCG GGCACAGCGA TTTCGACCGC TTTCTGGCGA CGCTGAACCA GGAAAAGCGC
AAGAAGATCC GCCAGGAAAG GCGCAAGGTG CATGAGGCCG GCGTGCGCTT TCGCGCCCTG
CACGGGCCGG ACATGGGCGC ACAGGACTGG GCCTTTTTCT ACCGCTGCCA CGAGCGAACC
TACCTGGAGC ATGGCAACGC CCCGTACCTC GAACCGGCCT TCTTCGAGGC CATGGCGCGC
CAGATGCCCG AGGCTTGGCT GATGTTCATC GCCGAGCGCG ACGGCCAGCC CATGGCCTGC
AGCCTGATCG CGCTGGATGC TGCGGCCGCA AGGCTGTCAG CGGGCCATAC GGGCGGGCGC
GCCCATGCGC CGCAGGCCCC ACAGGGAACG GCCTACGGCC GCTACTGGGG CGCACTGGAG
CGCGTGGATT GCCTGCATTT CGAGGCCTGC TACTACCAGC CCATCGCCTG GTGCATAGAG
CGCGGCATTG CGCACTTCGA GGGAGGCGCC CAGGGCGAGC ACAAGATGGC ACGGGCACTG
TTGCCCGTGG TTACTCCCAG CGCCCACTGG ATTGCCCACC CGTCCTTTGC CGATGCCATC
TCGCGCTTTC TGGACCGCGA GGGCGAGGGC ATGGCCGGCT ATCTGCAGGA GCTGCAGGCC
CACAGCCCGC TGCGCCAGGG GTAA
|
|---|
| Protein sequence | MAETAIITRV LDSVQQLDAQ AWNALLASQA APTPFMRHEY LSALESSGSA VPQTGWAGRV
VTLWQGGELV AACPVYAKAH SYGEYVFDFA WARAYAQHGL DYYPKGVLAV PFTPVPGSRL
LARTPLLRAA LVRAVREWAQ AQQLSSLHLL FSDAEDLAAC DADGWMQRST VQFHWSNQGA
DGAGHSDFDR FLATLNQEKR KKIRQERRKV HEAGVRFRAL HGPDMGAQDW AFFYRCHERT
YLEHGNAPYL EPAFFEAMAR QMPEAWLMFI AERDGQPMAC SLIALDAAAA RLSAGHTGGR
AHAPQAPQGT AYGRYWGALE RVDCLHFEAC YYQPIAWCIE RGIAHFEGGA QGEHKMARAL
LPVVTPSAHW IAHPSFADAI SRFLDREGEG MAGYLQELQA HSPLRQG
|
|---|
| |