Gene Daci_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4848 
Symbol 
ID5750451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5354128 
End bp5355573 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content70% 
IMG OID641299964 
Productzinc finger SWIM domain-containing protein 
Protein accessionYP_001565862 
Protein GI160900280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCGTG TATTAGGAAC AGAGAGCGAA GTGCTGGCGC TGTCGCCGGA CGCCTCATCC 
AGCAAGGCCG CCAAGGGCCT GCAATCGCCC GCCAAATGGC CCTCCATGGG CGCCAATGAT
GTGGCGGTCT GGGGTGAATG CCAGGGCAGC GGCAGCAAGC CCTACCAGAC CCAGGTGGAC
CTGTCGGGGC CTTCCTTCAA ATGCTCTTGC CCCAGCCGCA AATTCCCCTG CAAGCACGGG
CTGGCGCTGA TGCTGATGCG TGCCGGCGGG CAAGTCCCCG AAGGCGGTGA TCCGCCCGCC
TGGGTGCAGA CCTGGCTGGA CAGCCGTCAG GAAAAGGCCG AGAAGAAAGA GGCCAAGGCT
GCCGCCGCAG CGGCCGAGCC GCCACCCGAT CCCGAGGTCG CGGCCAAACA GCAGGCCAGG
CGCGAGGACA AGCGCTGGGA CAAGGTCGAA GCCGGCCTGC AGGAGTTGTC GCTGTGGATG
CAGGACATGG TGCGTGCGGG CCTGGCCAAC CAGGCCAGCG ACACGCAGAT GCGCCAGCGC
TGGAACAACA TGGCCGCGCG CATGGTCGAT GCGCAGGCCA CCGGCATGGC GGCGCGCATC
AAGGATTGCC GGGATCTGGT GGACAGCCAC CGCGACTGGC CGCGCGACAT GCTGGTGCAG
CTGGGCCACT GGCAGTTGAT CATCGACGCC GTTCGCCGCC GCGAATCGCT CAGCCCCGAG
GTCAAGGCCG ACGTGATGGC CGCGCTGGGC TGGCCCATGG ACAAGGCCGA GGTGCAGGCC
AGGGGCCAGC TGGTCGAGGA CGAATGGCTG GTGGCCGGCC TGCGCATGAT CGAGCGCGAA
GGCCGGCTCA TGGAGCGGCG CGTCTGGCTG CAGGGCCAGC GCACGGGGCG CATGGCCCTG
GTGCTGGACT ATGCGCAGGG CGGGCGCGGC TTTGAATCGG CCTGGGTGCC GGGCCATCGC
TACGGCTGCG CGCTGAATTT CTATCCGGGC CATGCGCCGC TGCGCGCCAT TGCGGCCAAT
GGCAACGGGC CTGCGCTGCC TGCCGATGGC GCCAGCCCGC TGGCCACCTC GGCCGGGGGC
GACGTCCTGC AACTGCTGGG CCAGCGCATT GCCGCCAACC CGCTGCAGGC CACGCAGCCG
CTGTGCCAGG ACCGACTGCG GCTGGTGCCC GCCCAGGGCC AGTGGTTCGC GGCCTGGCCC
CAAGCGCTGG ATGCATCGCC GGTCACCCTT GGCACGGCGG CGCCAGTGCA GCCCGTTCCC
GTGGCGATTG ACGATGCCGA GGCCTGGCGC CTGCTGGCGC TCAGCGGCGG CGCGCCCATG
CAGCTGTTTG GCGAATGGGA GCCCGGCCCG GCCGTGGGCC GCTGGCGGCT GCTGAGCGCC
TGGCAGGCCC GCGAAGGCGA AACCGCCCAG CAATGTATCT GGCAGAACCA GGGTGATCCG
GTATGA
 
Protein sequence
MSRVLGTESE VLALSPDASS SKAAKGLQSP AKWPSMGAND VAVWGECQGS GSKPYQTQVD 
LSGPSFKCSC PSRKFPCKHG LALMLMRAGG QVPEGGDPPA WVQTWLDSRQ EKAEKKEAKA
AAAAAEPPPD PEVAAKQQAR REDKRWDKVE AGLQELSLWM QDMVRAGLAN QASDTQMRQR
WNNMAARMVD AQATGMAARI KDCRDLVDSH RDWPRDMLVQ LGHWQLIIDA VRRRESLSPE
VKADVMAALG WPMDKAEVQA RGQLVEDEWL VAGLRMIERE GRLMERRVWL QGQRTGRMAL
VLDYAQGGRG FESAWVPGHR YGCALNFYPG HAPLRAIAAN GNGPALPADG ASPLATSAGG
DVLQLLGQRI AANPLQATQP LCQDRLRLVP AQGQWFAAWP QALDASPVTL GTAAPVQPVP
VAIDDAEAWR LLALSGGAPM QLFGEWEPGP AVGRWRLLSA WQAREGETAQ QCIWQNQGDP
V