Gene Daci_4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4845 
Symbol 
ID5750448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5348599 
End bp5351163 
Gene Length2565 bp 
Protein Length854 aa 
Translation table11 
GC content72% 
IMG OID641299961 
Producthypothetical protein 
Protein accessionYP_001565859 
Protein GI160900277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT CTGCCAATCC GCTTCATTTC TTCGGCATCC GCCACCATGG CCCGGGCTGC 
GCGCGCAGCC TGCTGCAGGC CCTGGAGCAG CTGCAGCCCG ACTGCCTGCT GGTGGAGGGA
CCGCCCGAGG GCGAGTCCCT GCTGCCCATG CTGCAGCATG CCGACCTGCA GCCGCCCGTG
GCCATGCTGG TCTATGTGCA GGACAGTCCG GCCCATGCCG CCTTCTATCC CTACGCCGAG
TTCTCGCCCG AATGGCAGGC CCTGCAATGG GCGGCGCGCC AGGGCGTGGC CACGCGTTTC
ATCGACCTGC CCCAGACCCA CCGCATGGCG CTGGACATGG CCGAGCAGGA GCGGCGCCGG
GCCGAGGCGG CGGCAGCAGA TGCAGCTGAT GCAGGCGCGG ATGCGGCCGA TGAAGGCCAG
GATGCAGATG CCGGCTCCGA TTCCGTCGCC GCTGCGGCAG ACGGCAGCCA GCTCCAGAGC
AATGCCGCCG AGGCCCTGGA CCGCGACGAC ACCACGCAGT CCGTGCCGGC TGCCGACCTC
GCCGTCGATC CCTCGGACTC CGGCAGGCGG GACTGGCGCG ATCCGCTGGA CCTGCTGGCC
GAGGCCGCTG GCTACCCCGA CGGCGAAAGC TGGTGGAACC GCATGGTCGA GGAACGCGGC
GACGGCGCCA CCCTGTTCGA GGGCATTGCC GAAGCCATGA CCGTGGTGCG TGCCGAGCTG
CCCAACGAAG TGCGCGGAGA ACGCCATGCC CAGCGCGAGG AGCTGCGCGA AGCCTGGATG
CGCCAGTGCA TGCGCGAGGC CGTCAAGGCC GGCCACCAGC GCATTGCCGT GGTCTGCGGC
GCATGGCATG TGCCGGCCCT GCAGGCGCAG GTCACCGCCA AGGCCGATGC CGCCACGCTC
AAGGGCCTGC CCAAGGCCAA GGTCCAGGCC ACCTGGGCAC CCTGGACCTA CCGCAACCTG
TGCTCATCCA GCGGCTATGG CGCGGGCGTG GATTCGCCGG GCTGGTATGA ACATCTGTGG
CGCTGCTCCG AGCCTGTGCC CGAGTCCTTG CTCCAGCCCG CACCTGCTGC CGACCCGGCA
CGCGCCAGCA CCCAGCGCAC CGTCGGCTGG CTGGCGCGCG TGGCCCATCT GCTGCGCTCC
AAGGACCTGG ACTGCTCCAG CGCCCACATC ATCGAGGCCA CGCGCCTGGC CGAAAGCCTG
GCGGCCCTGC GCGGCCACGC CAGCCCCGGC CTGCCCGAGC TGGACGAGGC CATCGTCACC
GTCATCAGCA TGGGCGAGCG CACGCCGCTG CGCCTGATCG AGCGCGAACT CAGCGTGGGC
GACCGCATCG GCGGCGTGCC CGCCGACGTG CCCCAGGTGC CGCTGCAGCG CGACATCGAG
CAGCAGCAAA AAAGCCTGCG CCTTAAGCCC GAGGCGGCCG CCAAGGTCCT GGCCCTGGAC
CTGCGCAAGG ACACGGACCG CGAACGCAGC CACTTCCTGC ACCGCCTGCG CCTGCTGGGC
ATAGAGTGGG GCAGCGTCAC CACCGACCAG CAGCGCAACC GCGGCACCTT CCGCGAAAGC
TGGCAGCTGC AGTGGGAGCC CGAGCTGGCC GTGCGCATCA TCGAGGCCAG CCGCTACGGC
GGCACCCTGG TGCAGGCCGC CGCGGCCAAG GTGCGCCAGG CGCTGACGCC CGAGACCCCG
CTGCCCGAGC TGGCCAAGAC CATCGACGAC GCCCTGCTGG CCGACCTGCC GCACCTGGTC
GATGCCCTCA TGCACGACCT GGCCGACCGC TCGGCCAGCA CCGGCGATGT TTCCCAGCTC
ATGCAGGCGC TGCCGCCGCT GGCCAATGTG CTGCGCTACG GCAGCGTGCG CCAGACCGAC
ACCCAGGCCC TGGCCACGGT GATCGACAGC ATGGCGCTGC GTGCCGCCAT CGGCCTGCCC
CTGGCCTGCA TGGCGCTGGA CGAAGACGCT GCAAGACACA TGCAGGCCAC GGTGCTGCAG
GCCCACGAGG CCCTGCGTCT GCGCGATGCC GAGGAGCCGC GCGAAGCCTG GTTCGGCGCC
CTGCGCAGCA TTGCCATGGG CGACGCAGGC GCCGCCTTGC TGCGCGGCGC GGCCTGCCGC
CTGCTGCTCG ATGCCCACCG CCTGGACAGC GAGGCCGTGG CCACGCAACT GGGCCGCAAT
CTCTCGCTGG GCGTGCCGCC GCTGGACGCT GCCGCCTGGC TGGACGGCTT TCTCAACCGC
CAGGCCCTGG TGCTGCTGCA CGACGACGCC ATCTGGGGCG CCGTCGATGC CTGGCTGGCG
CAGCTGGGCG AGACCCAGTT CACCCAGATC CTGCCCCTGG TGCGCCGCAG CTTCTCGGCC
TTCTCCAACC ATGACCGCCA GAGCCTGGGC GAAAAGGCCC GGCGCGGCCA GGGCAGTGCG
GCCGTGGCGG CCGCATCCGC AGGTGCCGCA GGCGCGGCAG GCGATGGGGA CGACGGCGCC
TGGAACGAGG CGCGTGCCGT GCTCGCCATT CCCGTACTCG ATCAACTGCT GGGCCTGAAC
CTGCCCGCGC AACCGCTGAC CCGCCTGCAG GAGGCCCAGC CATGA
 
Protein sequence
MATSANPLHF FGIRHHGPGC ARSLLQALEQ LQPDCLLVEG PPEGESLLPM LQHADLQPPV 
AMLVYVQDSP AHAAFYPYAE FSPEWQALQW AARQGVATRF IDLPQTHRMA LDMAEQERRR
AEAAAADAAD AGADAADEGQ DADAGSDSVA AAADGSQLQS NAAEALDRDD TTQSVPAADL
AVDPSDSGRR DWRDPLDLLA EAAGYPDGES WWNRMVEERG DGATLFEGIA EAMTVVRAEL
PNEVRGERHA QREELREAWM RQCMREAVKA GHQRIAVVCG AWHVPALQAQ VTAKADAATL
KGLPKAKVQA TWAPWTYRNL CSSSGYGAGV DSPGWYEHLW RCSEPVPESL LQPAPAADPA
RASTQRTVGW LARVAHLLRS KDLDCSSAHI IEATRLAESL AALRGHASPG LPELDEAIVT
VISMGERTPL RLIERELSVG DRIGGVPADV PQVPLQRDIE QQQKSLRLKP EAAAKVLALD
LRKDTDRERS HFLHRLRLLG IEWGSVTTDQ QRNRGTFRES WQLQWEPELA VRIIEASRYG
GTLVQAAAAK VRQALTPETP LPELAKTIDD ALLADLPHLV DALMHDLADR SASTGDVSQL
MQALPPLANV LRYGSVRQTD TQALATVIDS MALRAAIGLP LACMALDEDA ARHMQATVLQ
AHEALRLRDA EEPREAWFGA LRSIAMGDAG AALLRGAACR LLLDAHRLDS EAVATQLGRN
LSLGVPPLDA AAWLDGFLNR QALVLLHDDA IWGAVDAWLA QLGETQFTQI LPLVRRSFSA
FSNHDRQSLG EKARRGQGSA AVAAASAGAA GAAGDGDDGA WNEARAVLAI PVLDQLLGLN
LPAQPLTRLQ EAQP