| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4828 |
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| Symbol | |
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| ID | 5750431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5331947 |
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| End bp | 5332837 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299944 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001565842 |
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| Protein GI | 160900260 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.172865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG ACGACCTCAT CTACAAGCCC GGCCTGCTCC AGGGCGAACG CATCCTCGTC
ACTGGCGGCG GCACCGGCCT GGGCCGTGTC ATGGCCGAGG CCTTTCTCAT GATGGGCGCC
GACATCTACC TGTGCGGCCG GCGCGGCGCC GTGGTCGAGC AGACAGCGCA GGAGCTGGTG
CAGCAGCACG GCGGCCGGGC CACGGGCCAT GCCTGCGACG TGCGCCAGCC CGAGGCCGTG
GAGCAGATGA TCGAGGCCAT CTGGGCCGAT GGCGGCGCGC TCACGGGTCT GGTCAACAAC
GCGGCCGGCA ACTTCGTCAG CCGCACCGAG GACCTGTCCA TGCGCGCCTT CGACGCCGTG
GCCAACATCG TCATGCGCGG CAGCTTCAAC CTCACGCTGG AGTGCGGCCG CCGCTGGCTG
GCCGAGGGCC GCAAGGCCAG CGTGCTGTCC ATCCTCACCA CCTGGGTCTG GAACGGCTCG
GCCTTCACCG TGCCCTCGGC CATGGCCAAG TCGGGCGTGC ATGCCATGAC GCAGTCGCTG
GCCGTGGAAT GGGGCAACCG GGGCATACGC TTCAACGCCA TCGCGCCGGG CCTGTTCCCC
ACCGAAGGCA TGAGCGCGCG GCTGAACCCG CAGGGCGGCG AGCATGTGCG TGCCGACAAC
CCCATGGGCC GCAACGGCCG CATGCCCGAG CTGGCCAACC TGGCCGTCTT CCTCATGAGC
CGCCAGGCCG AGTACCTGAC GGGACAGACC ATCGCCATAG ACGGCGGACA ATACCAGGCG
ACGGGCGGCA ACTTCGCCGG GCTGGCCAGC TGGAGCGACC AGGACTGGGC GAATGCGCGC
AGCGCCATCG AATCGCGCAA CGCGGCCGAC CGCCAGCAAA GAACCGCATA G
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| Protein sequence | MTLDDLIYKP GLLQGERILV TGGGTGLGRV MAEAFLMMGA DIYLCGRRGA VVEQTAQELV
QQHGGRATGH ACDVRQPEAV EQMIEAIWAD GGALTGLVNN AAGNFVSRTE DLSMRAFDAV
ANIVMRGSFN LTLECGRRWL AEGRKASVLS ILTTWVWNGS AFTVPSAMAK SGVHAMTQSL
AVEWGNRGIR FNAIAPGLFP TEGMSARLNP QGGEHVRADN PMGRNGRMPE LANLAVFLMS
RQAEYLTGQT IAIDGGQYQA TGGNFAGLAS WSDQDWANAR SAIESRNAAD RQQRTA
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