Gene Daci_4758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4758 
Symbol 
ID5750350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5251090 
End bp5251779 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID641299863 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001565772 
Protein GI160900190 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.635667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCG TGTCCGTGCG TGAGGCCATG AGCCAGGGCA TCGAGGTCTT CAGGCTGGAC 
CTGGACCTGT CGGCCGAACT GAGCGACAGC CTGCCGCACC TGACCCCCGA GGAGCGCGGT
CGCGCCGCGC GCTTCGTGCG GGCCGCCGAC CGGCTGCGCT TCGCACAGAC ACGCGCTGCC
ACGCGGCGGC TGCTGGGGCG CAGGCTGGGC TGCTGCCCGG CAGATGTGCC GCTGGCGGTC
GGCGTCCACG GCAAGCCCTT TGTCGACGAG GACCCGCTGC GGGCACCGCT CTTCAATGTC
TCGCATTCGG GCGGGCATGC GCTGATCGCG CTGGCCGATC CCGGTGGCGT GCTGCACCTG
GGCGTGGACA TCGAGCAGCA CAAGCCCGAC CTCGATGCCG AGGTCATGCT CGACGCCGTC
TGCACCGACC AGGAACGCGC CAGCGTGCGC CGTGCGCCTG ATCGGCTGGC GGCCTTCTAC
CAGCGCTGGG TGGGCAAGGA AGCCGTGCTC AAGGCCATCG GCATCGGCGT GGCCGACCAC
CTGCGCTCCA TAGGCATCAG CCCGGGAGGG GACGGACGGC TGGCCATCGC CTGCGCGGTC
CCCGACTGGA ATGGTTTTCA AGCGATGGCG CTGCCAGCGC CGCCGGGCTA CGCGGCAGCT
CTTGCGTGGC GCACCAAGGA ATCGACATGA
 
Protein sequence
MQLVSVREAM SQGIEVFRLD LDLSAELSDS LPHLTPEERG RAARFVRAAD RLRFAQTRAA 
TRRLLGRRLG CCPADVPLAV GVHGKPFVDE DPLRAPLFNV SHSGGHALIA LADPGGVLHL
GVDIEQHKPD LDAEVMLDAV CTDQERASVR RAPDRLAAFY QRWVGKEAVL KAIGIGVADH
LRSIGISPGG DGRLAIACAV PDWNGFQAMA LPAPPGYAAA LAWRTKEST