| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4741 |
|---|
| Symbol | |
|---|
| ID | 5750333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5196927 |
|---|
| End bp | 5197388 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641299846 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001565755 |
|---|
| Protein GI | 160900173 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0117203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.418796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA TGAATGAATC GCCCCCGAGC CGCCCCGCGC CGCAGCCCCG TTCGGCCTAT
GCGGCATTCC GACGCATCAG CACGCGCTGG TCGGACAACG ATGTCTACGG GCACGTCAAC
AACGTCGTCT ATTACAGCTG GTTCGATACG GCGGTGAATG CCCATCTGAT AGAGCAGGGC
GCGCTGGACA TTCATGCGGG CGAGACGATA GGACTGGTCA TAGAGACCCA ATGCAATTAC
TTCGCCCCGC TGGCCTTTCC GCAGGAGGTG GATGCCGGCA TCCGCGTGGC CCGCATCGGC
GGCTCCAGCG TGCGCTACGA GGTGGGGCTG TTTGCGCAGG GTGAGCCGCT GTCGGCCGCA
GCCGGGCATT TCGTCCATGT CTACGTGGAC CGGCAGACGC GCCGGCCTGC CCAGATTCCG
CAGGCGCTGC GCCGGGTGCT GGAGCCGCTG CTGCGCGGTT GA
|
|---|
| Protein sequence | MAAMNESPPS RPAPQPRSAY AAFRRISTRW SDNDVYGHVN NVVYYSWFDT AVNAHLIEQG
ALDIHAGETI GLVIETQCNY FAPLAFPQEV DAGIRVARIG GSSVRYEVGL FAQGEPLSAA
AGHFVHVYVD RQTRRPAQIP QALRRVLEPL LRG
|
|---|
| |