| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4684 |
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| Symbol | |
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| ID | 5750275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5138939 |
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| End bp | 5140441 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299788 |
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| Product | lambda family phage portal protein |
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| Protein accession | YP_001565698 |
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| Protein GI | 160900116 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.892524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC GTACCGTAGC CCGCAGGGCC TCCCCCACGC TGGTTGACCG TGTTGTCGGC
TATTTCTCGC CCGCGCAGGG CGTGCGCCGC CAGGTTGCCC GGGAAATGCT GGTGCGCGCC
TACGAGGGCG CCAGCCGCGC CGATGGATGG CGCGTCAAGC GCTCGGGGGC CAGCCCCACG
GCAGACCACG CCGCCGATGC GCGCGAGCTG CGCATGCGCG CGCGCTCACT CGCGCAGAAC
GTGCCGAACA TCGTGCGCGC CGTCAATGCC GTGCTCGCCA TGCGCGTAGG CCAGGGCATC
GTGCCCGTGT GGGCCGACGA GGGCCTGGCC AAGCGCTGGC GCGAATGGGT GCCCCATGCC
GACTATGACG GCCTGCTGGA CTTCTACGGC CTGCAGTACA AGGCCGAGCG CACGCGCGAT
GTCGACGGCG CCGTGCTCAT CCGCAAGCAC ATCCAGCGCA TGGGCTCCAC GGTGCCGCTC
AAGCTGCAGC TGCTGGAGAT CGATTTCCTG GACGTGGAGC GCAACGGCGT GCTGGCTGGC
GGGCGCGAGA TCATCCGGGG CATCGAATAC GACAAGCGCG GGCAGCGCGT GGCCTATTAC
CTCTTCGACC GTCACCCGGG TGATGCCGGC ATGTGGACCC TGGGGCGCAG CGGCACCAGC
CAGCGCGTGC TGGCCGAGGA AATCATCCAC TTCTTCGACT CCGAGCGCCC CGGCCAGCAG
GACGGCATCA CGCGCCTGGC GCCCATCATC GCCAAGGTGC GCGACCTGCA TACCTACGGC
GACTCTGAGC TGCAGCGCAA GCAGCTGGAA TCGCGCATGG GTGTGCTGGC CGAGATGGAA
GGGGCTGGCG GCATGCCGCC GCCGCTGCCC GAGGAGGCCG GGGGGCAGAA GCCCGGCCTC
ATGGACCTGG GAGATCTTGC GGGCGGCGGC ATCGTGGGCC TGCCGCCGGG CATGACCAAT
CCCACCTTCA TCGAGCCGAA GGCCGTGCCG GGCTTTGGCG ACTACATGAA AGGGGGTTGG
AAGGAGGTGG CCGCAGGCTA TCGCTGCCCC TACGAGCTGA TGACGGGCGA CTTGACGGAG
GTGAATTTCA GCACCTCGCG CATGAGCATG AACCAGTTCC GGGCCGAGGT CGAATCCGAG
CAGTGGCGCG TCACCGTGCC GCGCCTGTGC GCTCCCATTG CGCGGTGGTT TGTGGCGGCC
GTGGATCTGG TCGCCCCGGT GCCGGCCGTT GTGGCTGCGC CGGACTGGAG CACGCCGCGT
TGGGCCAGCC CGAACCCTGT GCAGGACGTG GCCAGCGACC TGAGCGCCGT CAAGGGCGGT
ATGCAGAGCA TCAGCGAAGT GATCCGGCGC CGGGGCTATG ACCCCGAGGC CGTCTTCAGC
GAGCTGGAGG GCGACCTGGT GCAGCTGCGT GATCGCGGCA TCCTGCCCCT GCTGGCTGCG
CTGTGGGGTG CGCAGAACCC CATTGACTTA GTGGCCCAGA TGGAGGGGCA GGGGCAGAAG
TGA
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| Protein sequence | MQRRTVARRA SPTLVDRVVG YFSPAQGVRR QVAREMLVRA YEGASRADGW RVKRSGASPT
ADHAADAREL RMRARSLAQN VPNIVRAVNA VLAMRVGQGI VPVWADEGLA KRWREWVPHA
DYDGLLDFYG LQYKAERTRD VDGAVLIRKH IQRMGSTVPL KLQLLEIDFL DVERNGVLAG
GREIIRGIEY DKRGQRVAYY LFDRHPGDAG MWTLGRSGTS QRVLAEEIIH FFDSERPGQQ
DGITRLAPII AKVRDLHTYG DSELQRKQLE SRMGVLAEME GAGGMPPPLP EEAGGQKPGL
MDLGDLAGGG IVGLPPGMTN PTFIEPKAVP GFGDYMKGGW KEVAAGYRCP YELMTGDLTE
VNFSTSRMSM NQFRAEVESE QWRVTVPRLC APIARWFVAA VDLVAPVPAV VAAPDWSTPR
WASPNPVQDV ASDLSAVKGG MQSISEVIRR RGYDPEAVFS ELEGDLVQLR DRGILPLLAA
LWGAQNPIDL VAQMEGQGQK
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