Gene Daci_4679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4679 
Symbol 
ID5750270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5134927 
End bp5135595 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID641299783 
Producthypothetical protein 
Protein accessionYP_001565693 
Protein GI160900111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.768323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCC AAAACGTTCG TACCTCGGCC GGCAGCAAGC TGCTGATCTG TGCCGCCCGG 
CCAGCATCCT ACGATGCTGC CGGCTTCCAG GCCCTGGCCT TCAAAGAGAT CGCTGAGATC
ACCGACCTGG CCGAACTGGG CCGGGAATAC AACCAGGCCA CGCATTCGCC CCTGGCAACC
CGCCGCATCG TCAAGCGCAA AGGCAGCTTC AACGATGGCA GCCTGTCCGT GCCCATGGCC
CGCGACATGA ACGACGAAGG CCAGGTGCTG CTCAAGGCTG CATCTGTGTC CGACGACAGC
TACAGCTACT GCATCCGCCT GCAGGACGGT TCGAGCCACT ATTTCACGGC GCAGTGCATG
AGCTTCAAGC TCAACGTGGG CAGCGTCGAT TCCATCACGG CGCACACGGC GCAGTTGGAA
ATCGACAACG ACATCATCGA AGTCCCGGCC ATCTCGTTCA CCCTGGCCTA CACGGCCGGC
GCCAATGGCT CCATCGTGGG CGTCGCCAGC CAGACCGTGC TGCAGGGCGC CACGGGCAAG
CCTGTGTTCG CGCAGGCTGC GGCCGGCTTC GACTTCGAAA AGTGGAGCGA CAACAGCACG
GAAAACCCGC GCTCCGATGC CAACGTGCTC GCCAACGTGG CGGTGCAGGC CAGCTTCATC
CCTGAGTAA
 
Protein sequence
MAVQNVRTSA GSKLLICAAR PASYDAAGFQ ALAFKEIAEI TDLAELGREY NQATHSPLAT 
RRIVKRKGSF NDGSLSVPMA RDMNDEGQVL LKAASVSDDS YSYCIRLQDG SSHYFTAQCM
SFKLNVGSVD SITAHTAQLE IDNDIIEVPA ISFTLAYTAG ANGSIVGVAS QTVLQGATGK
PVFAQAAAGF DFEKWSDNST ENPRSDANVL ANVAVQASFI PE