Gene Daci_4665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4665 
Symbol 
ID5750256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5121029 
End bp5121727 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID641299769 
Producthypothetical protein 
Protein accessionYP_001565679 
Protein GI160900097 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.16454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.237072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAATC GATATAACAC CCCGCGTGAG ATCGAAGTTG AGCGCATGTG GAGGGTCGGC 
CGGCAGGCGC CACTGCCATG GTGGAAGCCG CACGTCACAC CACTGGCCCT GGGGCCGTAC
ATCAAGCCCG GTGGCGAGAT TGATGTAGGG CAGTGGGGCA TGATCCCGCG CAGTTCGAAG
ACGCGCCGGC CCATGACGGC TGGCGGCAAG CCGATGAGCA CGAACAACGC GCGGCGCGAG
ATGCTGGCCA AGTCGTGGAC ATTCGCGCCT GCCTGGCGCG CGGGCCAGCG CTGCCTGATT
CCCGTGGAGT CGTGGGTGGA GCCGTACTGG GGCCTCGGAT CGCGCAATGT GTGGTGGTCG
TTCCGGCGCG CGGACGGCTC ACCTGCGGCC CTGGCCGGGC TGTACAGCGA ATGGACTGAC
CCCGAGACTG GCGAGCTTGT GCCGAACTAC ACGATGATCA CGCAGCCGGC GGACGGGCAC
CCTGTCTTGG CCCTGATGCA CAGAACCGAA AAGGAAAAGC GCGGCGTGGT GATGCTGGAG
CCAGGCGATT GGGATGCCTG GCTGAATGGC AAACCGAAAC AGGCGGATGC GCTCATCAAG
CTGCCGCCGC TGGGTGTGCT GGTCAGCGGG GCCGAGAGAC CGGAGGAGGA GGCCCTGCTG
CCCGACGAGC AGTTGGCGGC GCTGAAGGCT GAGGGGTAG
 
Protein sequence
MCNRYNTPRE IEVERMWRVG RQAPLPWWKP HVTPLALGPY IKPGGEIDVG QWGMIPRSSK 
TRRPMTAGGK PMSTNNARRE MLAKSWTFAP AWRAGQRCLI PVESWVEPYW GLGSRNVWWS
FRRADGSPAA LAGLYSEWTD PETGELVPNY TMITQPADGH PVLALMHRTE KEKRGVVMLE
PGDWDAWLNG KPKQADALIK LPPLGVLVSG AERPEEEALL PDEQLAALKA EG