| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4572 |
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| Symbol | |
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| ID | 5750160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5030290 |
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| End bp | 5031741 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299673 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001565586 |
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| Protein GI | 160900004 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.345417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTTC CGTTGCTTGC GCGGCCCGCG CGCCTTGTGC CGTGGCTGGC GGCGCTGGGC
ATGGTCGCAG GGGCAGCCCA GGCTGCAGGG GAGGCTCCGG CCTCCCAGGC TGCCGCCGCG
ATGAGCTTCG TGCAGGCCCG CCAGGCGCTG CTGCAGGGCT CCGACCAACT GGCCGCCTCG
GCCAAGGCCG TTGAAAGCGC GCGCCTCAGA CGCCAGGGTA CGCAGGGGCT GGGCGGGCCT
TCCGTGGCCA TCACGGGCCT GGGCTACCGC TACTCGGCCA ATGCCGACAT CGATCTCGAT
CCTGCGCGGC GCACCCTGGA CGGCGTCCTC GGCCAGCTGC CGCCCTCGGT GGGGCCGGCC
ATTCCCTCGC TGCCGCAACT GCCCACCTCC TATGCCTTGC AGCGCAAGAG CACGAATGCC
TCGGCCAGCC TGTCCCTGGT CTGGCCGCTG TACCTGGGCG GCCTGTCCGA TGCGGTGCGC
AGTGGCCTGG ACGCTGCCAC CGACGAAGCC CTGGCCGATG CCGCCAGCAG CAGCCACGCC
CTGCATTCGC TGCTGGTGCA GCGGTACTTC GGTGCCCAGC TGGCCGAGCG GGCCGCACGG
CTGCGCGAGC GTGCGCTTGA AGGCGTGCGC ATGCATGACG CGGCGGCGCA AAGCATGCTC
AAGGCGGGCG TGATCTCCCG GCTGGAGCGC CTGCAGGCCC GTGCCGCGCT GGCCGACGCC
GAGCAGCAGG CGCGCAAATC GCGCGACGAC GCAGACCTGG CCGCAGCGGC GCTGGCGCGC
ACGGTCAAGG CGCAGCGGCA GGTGCTGCCC AGCACGCCGC TGTTCGTCAG CAGCCGGCCC
TTGCCGCCGC TGGACGGCTT CGTCGCCGCG GCCCAGTCGC ACCATCCGGG TCTGGACAAG
GTGCAGGCCA AGAAGCGCCA AGCCGAGTCG CTGCACGATG CCCAGGAGGC GCTGCGCCGG
CCGCAGCTGC TGGCCTTCGG TTCGCGCGAG GTCAACACCA GCGGCAAGCC CAACTGGGTG
GCTGGCGTGG CCGTGCGCTG GACGCTGTGG GACAGCATCG ACCGCGATGC GCTGGCCGCC
TCCTCGCAGC GCAAGATCGA GCAGGCCGAG CTGACCCAAG CCCAGGCGCT CAGCGACATC
GCGCTGCTGG TCGAAAAGAA CTGGCTGGGC GTGGAGCAGG CACGCCGCCA GTACCAGGCC
CAGCAGGCCC AGGAGGATCT TGCGCGCGAG CTGCTGCGGC TGCGCGAGGC CGGCCTGCGG
GAAGGCACCA GCACCACGCT GGACCTGATC GATGCCAGCC TCAATCTCGC CAAGGTCCAG
ACCCAGCGTG CCGAACTGGC CAACCAGTAT GTGCAGGCCC TGGCCGCACT GCTGGAGAGC
ACGGGCCAGA GCGAGGAATT CGACCGATTC ATGGCCCAGG CCGACATACA GATCCCACCC
GACGCACCAT GA
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| Protein sequence | MFFPLLARPA RLVPWLAALG MVAGAAQAAG EAPASQAAAA MSFVQARQAL LQGSDQLAAS
AKAVESARLR RQGTQGLGGP SVAITGLGYR YSANADIDLD PARRTLDGVL GQLPPSVGPA
IPSLPQLPTS YALQRKSTNA SASLSLVWPL YLGGLSDAVR SGLDAATDEA LADAASSSHA
LHSLLVQRYF GAQLAERAAR LRERALEGVR MHDAAAQSML KAGVISRLER LQARAALADA
EQQARKSRDD ADLAAAALAR TVKAQRQVLP STPLFVSSRP LPPLDGFVAA AQSHHPGLDK
VQAKKRQAES LHDAQEALRR PQLLAFGSRE VNTSGKPNWV AGVAVRWTLW DSIDRDALAA
SSQRKIEQAE LTQAQALSDI ALLVEKNWLG VEQARRQYQA QQAQEDLARE LLRLREAGLR
EGTSTTLDLI DASLNLAKVQ TQRAELANQY VQALAALLES TGQSEEFDRF MAQADIQIPP
DAP
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