Gene Daci_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4566 
Symbol 
ID5750154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5023652 
End bp5024542 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID641299667 
Productamidohydrolase 2 
Protein accessionYP_001565580 
Protein GI160899998 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0738992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGA ATTCACCCAG TTTCAACCGC TGTGCCGGTA ATTGCGACGC AGTAGAAAAT 
CCAGCGGAAC AATATCTGTT TCCAGAAAAT TCCTGCGATA CCCATTTCCA TGTATTTGGT
CGTTCCGATG ATTTTCCGTT GATTGCGGAA CGCGCCTATA CACCGGCCGT CGCGTCCATG
GACGATTATT GGAAAGCCTT TCGCCCATTG GGTGTGGACC GTTGCGTTCT GGTCCAGCCC
AGCGTGTATG GCCGCGATCA CGGCCTGCTC AAGCAGACGC TGCGCCATGC CGAAGCAGGC
CGCATGCGGG GCGTGGCCGT GATCTACGAG GACACGCCGG ATACAGAGAT CGAAGCGCTG
CACGCCCTGG GCGTGCGCGG CGCGCGGTGC AATGCGCTGT TTTCGGGCGG AGTCTCCGTC
TCCAGCCTGC GGGCCGTGGC CGACCGCATC CGGGGCCTGG GCTGGCATGT GCAATTGCTG
GTGAACGTGG ATGAAGACCC TGGCCTGGCG CAGCGCGTGG CCGACATGGG CGTGGCCGTG
GTGGTGGATC ACTTCGGCCA CCCGTCGCGC CAGCTGGGCG CCGGCGGGCC GGGCAGCCGC
AACCTGCAGG CGCTGATGAA GGAAGGGCGG GCCTGGGTGA AGTTCTCGGG CGCCTACCGG
ATATCGGCAA CGGCATCGGC CGTGGACCCG GCCGTGGTTC CCATTGCACA TGCCCTGGTG
CAGGCCAATC CGCACCGGAT CGTATGGGGG TCGGACTGGC CGCATCCCGG AATAAAGGCC
CGTTCGAATT CCGCTGGCGA ATTGGCACAG GCATTGGTGG ATTGGGTTCC GGAGGAATAC
AGGCACACGG TATTGGTCGA TAACCCCGCG CGCCTGTATT GGAGTCATTG A
 
Protein sequence
MPMNSPSFNR CAGNCDAVEN PAEQYLFPEN SCDTHFHVFG RSDDFPLIAE RAYTPAVASM 
DDYWKAFRPL GVDRCVLVQP SVYGRDHGLL KQTLRHAEAG RMRGVAVIYE DTPDTEIEAL
HALGVRGARC NALFSGGVSV SSLRAVADRI RGLGWHVQLL VNVDEDPGLA QRVADMGVAV
VVDHFGHPSR QLGAGGPGSR NLQALMKEGR AWVKFSGAYR ISATASAVDP AVVPIAHALV
QANPHRIVWG SDWPHPGIKA RSNSAGELAQ ALVDWVPEEY RHTVLVDNPA RLYWSH