| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4560 |
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| Symbol | |
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| ID | 5750148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5017541 |
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| End bp | 5018398 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641299661 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001565574 |
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| Protein GI | 160899992 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00464208 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAC GACCCCTTGA CCTGGATGCC GTGCAGAGCT TCGTGCACAT CGCGGAGCTG
GGCAGCTTCA CGCGCGCGGC CGAAGCCATG CAGACCACGC AGGCCGCCGT CAGCCTCAAG
CTCAAGCGGC TGGAGCAGCG GCTGGGCTGC AGGCTGGTCG AGCGCACGCC GCGCCATGTG
CAGCTGTCGG CGCTGGGCGC CGACTTCCTG CCCCATGCGC GCGAACTGCT GCAGGCCCAT
GAGCGCGCAC TGGCGCTGGC CGTCAGCACG CGCCAGCGGC TGACCATCGG CATCAGCGAC
CACGTGGCCG GGCCTGAGCT GCCGGCCCTG ATCGCCCGCA TGAATGCGCA GGACCCGCAG
CTGCTGATCG ACATCCGCAT CGCATCGTCC GGCCCGCTGC TGCAGGGGTT TGACCGGCGC
GAGTACGACA CGGTGATCGT GCGCACGCAT GCCGGGCGTG ACGACGGCGA GCTGCTGGCC
GAGGAGCCCT TCGGCTGGTT TGCCGCGCCC GGCTGGCAGC ACCGCGCGGG CGAGCCCCTG
CCGCTGGCCA CGCTGGCCGA GCCCTGCGGC GTGCGCGCCA TGGCCGGGCA GCTGCTGGAT
ACGGCGCGCA TGCCGTGGAC CGAGGTGTTC GTGGGCGGCG GCGTGGCAGC TGTCTCGGCC
GCCGTCATGG CGGGTCTGGG CGTGGCCGCG CTGGCGCCGC GCATGCTGGC CCTGGGCGCC
GTGGACGTGG GCCCGCGCCT GGGCCTGCCC ACGCTGCCGC GCCTGCCCGT GCTGCTGCAC
ACCCGCGTGC GCGAAGGTCG GCCGCGCGCG GCGCTGGATG CGCTGGGCGC CGCCTTCAAG
TCCGCCGTGC GTGGCTAG
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| Protein sequence | MIQRPLDLDA VQSFVHIAEL GSFTRAAEAM QTTQAAVSLK LKRLEQRLGC RLVERTPRHV
QLSALGADFL PHARELLQAH ERALALAVST RQRLTIGISD HVAGPELPAL IARMNAQDPQ
LLIDIRIASS GPLLQGFDRR EYDTVIVRTH AGRDDGELLA EEPFGWFAAP GWQHRAGEPL
PLATLAEPCG VRAMAGQLLD TARMPWTEVF VGGGVAAVSA AVMAGLGVAA LAPRMLALGA
VDVGPRLGLP TLPRLPVLLH TRVREGRPRA ALDALGAAFK SAVRG
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