Gene Daci_4528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4528 
Symbol 
ID5750116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4978912 
End bp4979718 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID641299629 
ProductABC transporter related 
Protein accessionYP_001565542 
Protein GI160899960 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG GCACGACGGG CACAACGGGC ATGACGGGCA TCACAGACGG GGCTGACGGC 
ATGGCGTTTC TCGATATCGA ACAGGTGGTG TTCACCTACC CTGGCCGGCC GCCCGTGGTG
GACGGCGTGG ACTGGCGCGT GCAGGCCGGT GAGGTCCACT GCCTGCTGGG CCGCAGCGGC
TGCGGCAAGA CCACCTTGCT CAAGCTGGCG GCGGGGCTGC TCAGGCCGCA GTCGGGCCGC
ATTCTGCTGC GTGGCGCCGA GCTGGCCGAG CCCGGCCCGC AGCTGGGCTT CATGTTCCAG
GCGCCCACGC TGCTGGAGTG GCATACGGCG CTGGGCAATG TGCTGCTGCC CGTGTCGCTG
CAAAGGCGCC CCGCGCCGCA GGACGAGCAG CGCGCCCTGG CGCTGCTGGA GCAGCTGGGC
CTGGCCAGCC ACGCGCAGCG CCATCCGCGC CATCTCTCGG GCGGGCAGCA AAGCCGCGTG
GCGCTGGCAC GGGCGCTGGT GCTGGACCCG CCGCTGCTGC TGCTGGACGA GCCCTTTGCC
GCGCTGGACG CCATCACGCG CGCCGAGCTG CAGGACGACC TGCTGCGCAC CTGCCGCGAG
CGCGGCACCA CGGTGCTCTT CGTCACCCAC GACATCAACG AGGCCGTCTA CCTGGGCGAC
CGCATCGCCC TCATGCACGG CGGGCGCATC GTGGCCGATA TGGCGGTCGA TCTGCCCGCG
CCGCGCACCC AGGCCATGCG CCACGGGCCG GCGTTCAACG AGCACTGCGC CCGCGTGCGC
GCAGCCATGG ACAGGACGGC GGCATGA
 
Protein sequence
MHTGTTGTTG MTGITDGADG MAFLDIEQVV FTYPGRPPVV DGVDWRVQAG EVHCLLGRSG 
CGKTTLLKLA AGLLRPQSGR ILLRGAELAE PGPQLGFMFQ APTLLEWHTA LGNVLLPVSL
QRRPAPQDEQ RALALLEQLG LASHAQRHPR HLSGGQQSRV ALARALVLDP PLLLLDEPFA
ALDAITRAEL QDDLLRTCRE RGTTVLFVTH DINEAVYLGD RIALMHGGRI VADMAVDLPA
PRTQAMRHGP AFNEHCARVR AAMDRTAA