Gene Daci_4495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4495 
Symbol 
ID5750083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4919924 
End bp4921372 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content70% 
IMG OID641299596 
Producthypothetical protein 
Protein accessionYP_001565509 
Protein GI160899927 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA TCGACCCCGC CCGCCACACG CGCCGCGCAT TCCTGCGCCG CAGCACGCAA 
CTGGCCGCCG CCGGTACCGC CCTGCCCTTC GCCCTGAACC TCGCCGCACT GGGCGAGGCC
GCCGCCTTCG AGGCGAACGA CTACAAGGCG CTGGTCTGCG TCTTCCTCTA CGGCGGCTGC
GACTACGCCA ACACCGTCGT GCCCTACGAC AGCACCCGCT ACGGGCAGTA CTCCGCCATC
CGCGGCGGCA ACAGCGACGG CACGGCCGGT GGCATTGCCC TGGCCCGCGC CGCGCTGGGC
AATACGCTGC TGCAACCCCG CACGGCGCTG GCCGGTGGCA TGCAGTACGC GCTGCACCCG
TCCATGACGG GCCTGGCCGG CCTCTTCAAC GCGGGCCGCG CGGCGGTGCA GCTGAACGTC
GGCCCGCTGC TGGTGCCGCT CACGCGGGCC CAATATGCCA CCGGCGACCG GCGCAGCTAC
CCGCTGCCGC CCAAGCTTTT CTCGCACAAC GACCAGCAGT CGGTCTGGCA GTCGCAGGGC
GCCGAAGGCT CCACCGTGGG CTGGGGCGGC AACCTGGGCG ACCTGGCGCT GTCGTCCAAC
GCCACGTCGC TCTTCACCTG CATCTCGGCC ACGGGCAACG CCGTGTTTCT CTCGGGCGAC
CAGGCGCTGC AGTACCAGAT CAGCCCGGGC GGCGCCGTGC CCATCAACGC CGTCAAGGGC
GCCAACGTCT ATGGTTTGAC CGCCGTGCGC GGCCTGCTGA GCGAGCTGGT GCAGACGGCC
GGCAGCCACG CAATGGAGGC CGAGTACGCC CGCGTCACGC AGCGCTCCAT CAGTGCCGAG
GGGCAGATCT CTTCGGCCCT CTCCAGCGGC AGCCTGTCCA CCGCCTTCCC TGCCAGCAAC
CCGCTGGCCG ACCAGCTCAA GGTGGTGGCC CGGCTCATCG CCGGACGCAG CGCGCTGGGC
ACGCGCCGGC AGGTGTTCTT CGTCTCGCTG GGCGGGTTCG ACCTGCACGA CAACCTGATC
GCCAACCAGC CGCAGCTGCT CGACAAGGTG AGCAGCGCCA TGACGGCCTT CTACAACGCC
ACGGCCGAAC TCGGCGTGGC CGACAAGGTC ACGGCCTTCA CCGCGTCGGA CTTCGGCCGC
ACGCTGACTT CCAACGGCGA CGGCTCCGAC CATGGCTGGG GCAGCCACCA CTTCGTCGTG
GGCGGCGCGG TGCGTGGCGC GTCCTTCTAT GGCGCGCCTC CGCCCATCAG CGTGGGCAAC
GGCAGCGGCA GCGAAGACCA GTGGCATGTC GGCCAGGGGC GCCTGTTGCC CAGCACCGCC
GTGGACCAGT ACGCCGCCAC CCTGGCGCGC TGGTTCGGCG TGTCGAATAC CGAGCTGGCG
GGGGTGCTGC CGCACATCGG CAACTTCGGC GGCTCGGCGT ATCCCATCGA TCTGGGGTTC
ATGGGCTGA
 
Protein sequence
MNFIDPARHT RRAFLRRSTQ LAAAGTALPF ALNLAALGEA AAFEANDYKA LVCVFLYGGC 
DYANTVVPYD STRYGQYSAI RGGNSDGTAG GIALARAALG NTLLQPRTAL AGGMQYALHP
SMTGLAGLFN AGRAAVQLNV GPLLVPLTRA QYATGDRRSY PLPPKLFSHN DQQSVWQSQG
AEGSTVGWGG NLGDLALSSN ATSLFTCISA TGNAVFLSGD QALQYQISPG GAVPINAVKG
ANVYGLTAVR GLLSELVQTA GSHAMEAEYA RVTQRSISAE GQISSALSSG SLSTAFPASN
PLADQLKVVA RLIAGRSALG TRRQVFFVSL GGFDLHDNLI ANQPQLLDKV SSAMTAFYNA
TAELGVADKV TAFTASDFGR TLTSNGDGSD HGWGSHHFVV GGAVRGASFY GAPPPISVGN
GSGSEDQWHV GQGRLLPSTA VDQYAATLAR WFGVSNTELA GVLPHIGNFG GSAYPIDLGF
MG