Gene Daci_4485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4485 
Symbol 
ID5750073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4908253 
End bp4909047 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID641299586 
ProductABC transporter related 
Protein accessionYP_001565499 
Protein GI160899917 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CGGCCACACT TATCTCCATT CCCACTCCGG CCCTGGAAGC CAAGGGCCTG 
GTGCGCCGCT TTGGCGCGCT GCTGGCCACC GACCATGTCT CGCTGTCGCT GGCGCCTGGC
GAGATTCATG CGCTGATCGG CCCCAATGGC GCGGGCAAGT CCACGCTCAT CCATCTGCTG
TCCGGCACGC TGGCGGCCGA TGCGGGCACG CTGGTGCTGG CGGGGCGCGA TGTGAGCGCG
CTCAACGCCC ACCAGCGCGT GGCGGCGGGG CTGTCGCGGT CTTTCCAGAT CACCAACATC
TTCAAGCAGT CCAGCGTGCT GGACAACCTG GTGCTGGCCG TGCAGGCGCA TGCGGGCAGC
AGCTTCAGCT TCTGGCGCCC GCGCGCGGCC GAGACCGCGC TCTACGAGCA GGCCCGCGAG
CTGGCGCGCG AATGCGCCAT TGACGCCAGC CTGCTGCAAC GCCCCGCAGG CACGCTGCCG
CATGGCGAGC AGCGCAAGCT GGAATTCGCG CTGGCCCTGG CTGCGCGCCC CGGCGTGCTG
CTGCTGGACG AGCCCATGGC CGGCATGGGG CCTGATGAAA CACTGCGCCT GACCGAGCTG
ATCGAGTCCC TGCGCGGCCG TGCCGCCATG CTGCTGGTGG AGCACGACAT GCAGGCCGTG
TTCCGCCTGG CCGACCGTAT CTCCGTGCTG GTCTACGGCC GCATCATCGC CACCGGCACG
CCCGACGAGA TACGTGGCAA CGCCGATGTG CGCCAGGCCT ACCTGGGCGA CGAAGAAGTG
AAGGAGGGCG CGTGA
 
Protein sequence
MSGAATLISI PTPALEAKGL VRRFGALLAT DHVSLSLAPG EIHALIGPNG AGKSTLIHLL 
SGTLAADAGT LVLAGRDVSA LNAHQRVAAG LSRSFQITNI FKQSSVLDNL VLAVQAHAGS
SFSFWRPRAA ETALYEQARE LARECAIDAS LLQRPAGTLP HGEQRKLEFA LALAARPGVL
LLDEPMAGMG PDETLRLTEL IESLRGRAAM LLVEHDMQAV FRLADRISVL VYGRIIATGT
PDEIRGNADV RQAYLGDEEV KEGA