| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4467 |
|---|
| Symbol | |
|---|
| ID | 5750055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4888048 |
|---|
| End bp | 4888500 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641299569 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001565482 |
|---|
| Protein GI | 160899900 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.192711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCG CCTTCGTCAG CCAGGTGCAG GTGCTGTTTC GCCATTGCGA TCCGGCCGGC
ATCGTCTTTT ACCCGCGCTA TTTCGAGATG GTCAACGACC TGGTCGAGGA ATGGTTCGAC
AGGGGAATGG GCCTGCCATT CCACACCCTG CATGTACAGC GCCAGGTGGG CACGCCCACG
GTGTCGGTGC AATGCGATTT CACGGCGCCC AGCCGCTGGC ACGACACGCT GCGCCAGGTA
TTGGAGGTGC GCCGCATCGG CGGGGCATCG TTCCAGTTCG ATGTGCGTTT CGAGGGGCCA
GATGGCCAAC GCCGGCTGTC TGCACGCATG ACCATCGTCA CCATGGATTT GCGCAGCATG
AAGGCCACGC CACTGCCTTC CGATCTGCGC GAGCGCCTGC AGGCCTATCT GGTGCCGCAG
GACGGTTTTA CGGATTCAAC GAGAACAGGA TGA
|
|---|
| Protein sequence | MASAFVSQVQ VLFRHCDPAG IVFYPRYFEM VNDLVEEWFD RGMGLPFHTL HVQRQVGTPT
VSVQCDFTAP SRWHDTLRQV LEVRRIGGAS FQFDVRFEGP DGQRRLSARM TIVTMDLRSM
KATPLPSDLR ERLQAYLVPQ DGFTDSTRTG
|
|---|
| |