| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4466 |
|---|
| Symbol | |
|---|
| ID | 5750054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4887639 |
|---|
| End bp | 4888043 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641299568 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001565481 |
|---|
| Protein GI | 160899899 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.136863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTC TGCAACCCCC GGACTGGCTG GCGCCCCGAG GCTATGCCAA TGGCATCCTG
ACCGAGATGA CGGTCGGCTC CCGGCTGGTG TTCGTCGGCG GCCAGATTGG CTGGAACGGC
CAGCAGCAAT TCGAGTCGGA CGACTTTGCG GAACAGGTGC GGCAGGCGCT GGCCAATATC
GTCGCCATCC TCGCCGAAGG CGGCGCCAGG CCCGAGCACA TCGTGCGCAT GACCTGGTAT
GTGACCGACA AGCAGGAATA CGTGGCGGCC TATCCGGCCA TTGGAAAGCA CTACCGCGAA
CTGATCGGGC GGCATTTCCC GGCCATGACG GCGGTGGAGG TGGCGGATCT GGTGGAAGAC
CGGGCCAAGG TGGAGATCGA GGTCACGGCG GTGGTGCCTG CATGA
|
|---|
| Protein sequence | MKTLQPPDWL APRGYANGIL TEMTVGSRLV FVGGQIGWNG QQQFESDDFA EQVRQALANI
VAILAEGGAR PEHIVRMTWY VTDKQEYVAA YPAIGKHYRE LIGRHFPAMT AVEVADLVED
RAKVEIEVTA VVPA
|
|---|
| |