| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4437 |
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| Symbol | |
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| ID | 5750025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4858529 |
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| End bp | 4859362 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299539 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001565452 |
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| Protein GI | 160899870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.553792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.62875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCG GAAAAACCAC CCTCATCGCC CACATCGGCG ACCCGACCGA GACCTTCAAG
TCGCCCATGA TCTACAACCC GTGGTTCGAC AGCCGGGGCA TTGATGCCTG CGTCGTGCCC
ATGGGCGTGA AGGCGGCGCA TTTCGCGCCG GACTTCGCGG CCATCATGCG TTTCACCAAC
CTGCGCGGCG CGCTGATCAC CATGCCGCAC AAGGTGTCCG TGGTGGACCT GGTGCACGAG
GTCACGCCCG CCGTGCACAT TGCAGGCGCC TGCAATGCCG TGCTGCGGCG CGAGGACGGC
ACGCTGCTGG GCGACCAGTT CGACGGCGCG GGCTTTGTGC GCGGCGTGCT GCGCAAGGGG
CGGCAGCTGC AGGGCGCGCG GGTGCTGATT TCCGGGGCAG GTGGCGTAGG GTCGGCGATT
GCCGCCTCGC TGGCGGCAGC CGGCGTGGGC GAGCTGATGC TGTTCGACAC GCGGGCTGAG
AGCGCGCAGG CCCTGGCAGG GCGGCTCGCT GCCTACTACC CGAGGATGAA GGTGGGCACG
GGCTCCAGGG ACCCGCAGGG CTTCGACGTG GTCGTCAACG CCACGCCGCT GGGCATGAAG
GACGATGACC CGCTGCCGTT CGATGTGCAG CGCATCGCGC CCACCACCTT TGTGGGCGAG
GTGGTGATGA AGTCCGAGTT CACGCCCCTG CTGCGCGCCG TGCGCGACAA GGGCTGCGAC
TTCCAGGTGG GCACGGACAT GCTGTTCGAG ATGATTCCCG CCTACCTCGA ATTCTTCGGC
TTCGGCAGCG CCACGCCCGA CGAGCTGCGC GCCACCGCCC ACATCTCCTA CTGA
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| Protein sequence | MISGKTTLIA HIGDPTETFK SPMIYNPWFD SRGIDACVVP MGVKAAHFAP DFAAIMRFTN
LRGALITMPH KVSVVDLVHE VTPAVHIAGA CNAVLRREDG TLLGDQFDGA GFVRGVLRKG
RQLQGARVLI SGAGGVGSAI AASLAAAGVG ELMLFDTRAE SAQALAGRLA AYYPRMKVGT
GSRDPQGFDV VVNATPLGMK DDDPLPFDVQ RIAPTTFVGE VVMKSEFTPL LRAVRDKGCD
FQVGTDMLFE MIPAYLEFFG FGSATPDELR ATAHISY
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