| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4373 |
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| Symbol | |
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| ID | 5749961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4789578 |
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| End bp | 4791770 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299476 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001565389 |
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| Protein GI | 160899807 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.116704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTT TCCCGCCCCG TGCGTTGGTG GCGGCACTTG CTGCCGTTCT GCCCACCCTG
GCTTCTGTTC CTGCGCTTGC GCAGCAGGCC GCCAGCCCTT CCCAATCTCC CGATGTGCCT
GAGGCCACCG TCACAGTTCA GCCCAGTACC TCTGCCGGCG GTCTGGGCGA GGTGCGCGTG
AGCGCCAAGC GCTTGGATGC GGCGCGCAAT GCGCTCTCGC CCGACACCGG TAGCTCCCTC
TACAACTTCA ACAGCGACGA CATCGCCCGT TTGCCGCAGG GCTCGGCCAC ACCGCTCAAC
CAAGTGTTGC TGCAAGCGCC GGGAATCGTG CAGGACTCGT ATGGTCAGTT GCATGTGCGT
GGCGACCATT CCAATCTGCA GTACCGTATT AATGGCGTGG TGGTCCCAGA GCCGATCAGC
GGCTTCGGGC AGATGCTGGA CACGCGCTTC GCCAACCAGA TCAACGTGCT CACCGGCGCG
TTGCCGGCGC AATACGGTTA CCGCACTGCC GGCGTGGTCG ACATCCACAC CAAAGGGGCG
GCCGACGACG ATGAGAGCCA GCCCAGGCCC TTCGGAGGAG AGGTCGGCAC CGTGCTTGGC
AGCAACGGCC GACGCGGTCT CAATACCCAG GTGCAAGGCG CGCAGGGGCC CTGGAGCTAT
TACCTGAGCG GCACCATCGC CGAAAGCAAT CTGGGTATAG AGAATCCCAC CGGCAAGCGC
AGCGCCATGC ACGACCACAC CACGCAAAAC AAGTCATTCG GCATGCTGTC GTACATGCTC
GATGCCGACA GCCGCGTGGG CTTCATGTTC GGTACGTCGA ACAGTCGTTT CCAGATTCCC
ACGCGGCCGG GCCTGACGCC GCAATTCACG CTGGATGGCG CCGTGTCTCC CAACTCGCAG
GACCTCAATG CCAACCAGCG CGAGCAGACG GACTTCCAGA TTTTGTCGTA CCAGCGCAAG
GTGTCGCCGC AGCTCGACTA CCAGGTCTCG TTGTTCCGCC GCTCCAGCCG CATCGACTAC
CTACCCGACC CGGTAGGTGA TCTGGTCTAT AACGGTGTGG CGTCCAACAT CAGGCGCACC
AATAGCGCCT ACGGCCTGCA AAGCGATGCC AGTTATCAGC TGAACGAGCG CCACACGCTG
CGTGCCGGCC TGTTCCTGCA GCGCGAGCGC TACGGGGTAG ACAACAGCTC TCAGGTCTTC
CCGGCCGACG AAAGCGGCGC TCAGACCAGC GGTACGCCGC TCACCATCAC CGACAATGCG
CGCAGCACCG GCGGCACGGT GGGCGTGTAC CTGCAGGACG AATGGAAGCC GAGCGAAAAG
CTCACCGTCA ACTACGGTGT GCGCTATGAC CATGTGAACA CCATCGTTAG CGAACAGCAG
CTCAGCCCGC GCCTGGGCGT GACCTACGAC TGGTCGAGCC GCACACGCCT GCATGCCGGC
TATGCGCGCT ATTTCACGCC GCCGCCGACT GAGAAGTTCG ATGCCACGAC GGTGGATAAA
TTCCTGGGTA CTACGAACGC GCTGCCGTCG GATGCCAACA CCGCCGTGCG CTCCGAGCGC
TCCAACTACT TCGACATCGG CCTCTCGCAC CAGCTCACGC CAAACCTGAC CCTCGGGCTC
GATGCCTACT ACCGCGACGT GCGCCACCTG CAGGACGAGG GCCAGTTCGG CAACGCGCTG
CTGTACTCGG CGTTCAACTA CGAGCGCGGC CGTATCTACG GCATCGAGGG CTCGGCCAAC
TACCGCCAGG GAAATTTCGG CGCCTACCTG AACGTAGCGG TCTCGCGGGC CATGGGCAAG
GGCTTGGAGA CCGGGCAGTT CAACTTCGAT GCCGAGGAGC TGGCCTACAT CAACAGCAAC
TGGGTGCACC TGGATCACGA CCAGCAACTG ACGGTCTCGG GTGGCGTGTC GTACCTGCAG
GCGGGAACGA CCTGGACGGC AAGCGCACTG TTCGGCTCGG GTTTGCGCCG CGGCTTTGCC
AATACCGAGC ATCTGCCCGC CTACTGGCAG TTGAACGTGG GCGCCGCGCG CGACTTCGAC
CTGCCAATGG TTGGCAAGTT GAAAACGCGT GTGTCAGTAC TGAACCTGTT TGACCGCAGC
TACGAGCTGC GCGATGGCAC CGGCATAGGC GTGGGCGCAC CACAGTTCGC ACCACGGCGC
ACCTTCCTGG TCTCGGTCAG CAAGCCGTTC TGA
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| Protein sequence | MTPFPPRALV AALAAVLPTL ASVPALAQQA ASPSQSPDVP EATVTVQPST SAGGLGEVRV
SAKRLDAARN ALSPDTGSSL YNFNSDDIAR LPQGSATPLN QVLLQAPGIV QDSYGQLHVR
GDHSNLQYRI NGVVVPEPIS GFGQMLDTRF ANQINVLTGA LPAQYGYRTA GVVDIHTKGA
ADDDESQPRP FGGEVGTVLG SNGRRGLNTQ VQGAQGPWSY YLSGTIAESN LGIENPTGKR
SAMHDHTTQN KSFGMLSYML DADSRVGFMF GTSNSRFQIP TRPGLTPQFT LDGAVSPNSQ
DLNANQREQT DFQILSYQRK VSPQLDYQVS LFRRSSRIDY LPDPVGDLVY NGVASNIRRT
NSAYGLQSDA SYQLNERHTL RAGLFLQRER YGVDNSSQVF PADESGAQTS GTPLTITDNA
RSTGGTVGVY LQDEWKPSEK LTVNYGVRYD HVNTIVSEQQ LSPRLGVTYD WSSRTRLHAG
YARYFTPPPT EKFDATTVDK FLGTTNALPS DANTAVRSER SNYFDIGLSH QLTPNLTLGL
DAYYRDVRHL QDEGQFGNAL LYSAFNYERG RIYGIEGSAN YRQGNFGAYL NVAVSRAMGK
GLETGQFNFD AEELAYINSN WVHLDHDQQL TVSGGVSYLQ AGTTWTASAL FGSGLRRGFA
NTEHLPAYWQ LNVGAARDFD LPMVGKLKTR VSVLNLFDRS YELRDGTGIG VGAPQFAPRR
TFLVSVSKPF
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