| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4368 |
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| Symbol | |
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| ID | 5749956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4784500 |
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| End bp | 4786683 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299471 |
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| Product | hypothetical protein |
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| Protein accession | YP_001565384 |
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| Protein GI | 160899802 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.150776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGAGC CCACGGCCCC GGACCTGTTC GCCCACGCCT TTCGCTGGCA CGAGAAATTC
CTGCCGCCCG TGCAGCAGGG CGACCGCCTT TTGCTGGCCA GCGAACGCGA CACCCTGGCC
CTGGGTTCTG CCGCCGTGCT GGCGCTGAAC GCCCCGCTGC AGGCAGGCAC CAGCCTCATG
CAGCACTGCG CTGCGGTGCC CGATGCGCCG CTTGCACAGA TGCTGCACGC CCTGGGCGCC
CTGCTGCGCC AGGGCCTGGT CCAGCCGGTA CAGCACAGCG GCTTGAACGG CCACGGTTAT
CTGCAGCCGG ATTTCTCGGC CCCGCCCGTG CGCCTGCAGG CATCGGAGCA GATCGACATC
GTCATGCTGA CTGCAGCGCT TGACAGCACA GCCGCCTGCC ACTGGGCTGT GGCCGTTGCC
GGGGCCACGC AGGCACCCGC CACCACCCCA CTCACCATCG TTTTCTGCGA CGACTATCTG
GACCCGCGCC TGGGCGCCAT TGACGCCGGC CAGCGTGCCG CAGGCCGGCC CTGGCTGCTG
GTGCGGCCAG CGGGCGAGCA GGCCATGGCG GGGCCGCTTT TCAAACCCCA GGCAGCGGCC
TGCTGGCATT GCCTCGCACA CCGCTGGCAA CGCAACCATC CCGCACGCGG CGGCAAGCAC
GGCCAGCCTC AGGACAGCGA CCGCTGCCCG CCCGTGCGCG CCGGCGCCGA CCTCATCGCC
ACGCGGCTGC AGGCCCTGCT GCCCATGGTG CAGCGCCTGC TGGCGCACAC CGATGCGGCG
CAAACCGTGT GGACGCTGGA GCCTGACCAG CCCCACCCGG TGGCCGCCCG CCCGCAATGC
CCGCACTGCG GCACGCCAGG GCTGATGGCC CTGCGCCAGC GTGAACGCAT TGCGCCAGTT
CCCGGCACGC ATGCCGCGCG CGCCGATGGC GGCTGGCGCA GCGTGCCGGC CGAGACCACG
GTGCAGCGCC TGTCGCAGCA CGTCAGCCCG CTGACCGGCG TGATTGCCCG GGTCACGCCG
CTGACGGCCG AGACCGACGA AGCGCTCACC ATCTACCGCA GCGAAATCTT CAGAACACCG
GCCCCCGGCA GCACCAGCCT GGCCGGCTCC GGAACACAGC TGTGCCTGGG CAAGGGCCTG
TCGGCCGTGC AGGCCCGCGC CAGCGCCATG TGCGAAGCCG TGGAGCGCTA CGCCGCCTTC
CACCAAGGCG ACGAAGCCGT GGTCATCGCC CCCGCCGCCG AGTTGGACGC GCCCTGCATC
GCGCCCACGG AACTGGCCCG CTTCAGCGAG CGGCAAACCG CCGGCTTTGC CACCGACAAG
CCACCGCATG CCGTGGCCCC CAGCACCGGC CAGGGCGAGC CCCTGTGGTG GGCTCCCGCC
TGGTCCCTGA CCGCCGATGC GCGCCGCTAC CTGCCGCTGG CCTTCTGCCT GGCCCATGCG
CCTGCGCAAA GCCAGTACCA CGTGGGCTGG ACCTCCAACG GCTGCGCCGC AGGCAACACG
CGGGAAGAAG CCATCCTGCA AGGCTTCATG GAACTGGTGG AACGCGACGC CGCCGCCATC
TGGTGGTACG GCCAGATCCG CAGGCCCGCC ATTGCGCTGC AAGGCATCGA CCAGGCCACA
CGCCAGCGAC TGGACCGCAG CTGCGGCCCG CAATGGTCAT ACTGGCTGCT GGACATCACG
CACGACTTCG GCATACCGGT GGTCGTCTCC GTGGGCCGCC ACGCTGACAC CGGCCAATGG
GCCGTGGGCT TTGGCTGCAG CCTGGACCGC GCCCTGGCCT GCGAACGCGC CCTCACCGAA
ATCAGCCAGC TGATCGCGGC CGGCAAAAGC TTTGCCGTGC CCGAGCCACT GCAGGCCTTC
CTGCACCCTG CGGACAGCGC CGATGCACCG CCGCAACAGC CTGCGTCTCT GTCTGGGCAC
ACGCCGGACA CCACGCCGCC GGACATTGCC CAGGCCATTG CGCGCTGCGT GGACATCGCA
CGCGGCCTGG GCCTGGAGAC CATCGTCTAC GACTACTCGC GCCCCGACAT CCCTGTGCAC
ACCGTCAAGA TCGTGATTCC CGGCCTGTGC CATATCTGGC CGGAACTGGG CAATCCACGG
CTGCGCAACG TACCCGTGGC CCTGGGCTGG CACAGCCGGC CGCTGCAGGA ATCCGAACTG
AATCCGCTGG CTCTGTACGT TTGA
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| Protein sequence | MPEPTAPDLF AHAFRWHEKF LPPVQQGDRL LLASERDTLA LGSAAVLALN APLQAGTSLM
QHCAAVPDAP LAQMLHALGA LLRQGLVQPV QHSGLNGHGY LQPDFSAPPV RLQASEQIDI
VMLTAALDST AACHWAVAVA GATQAPATTP LTIVFCDDYL DPRLGAIDAG QRAAGRPWLL
VRPAGEQAMA GPLFKPQAAA CWHCLAHRWQ RNHPARGGKH GQPQDSDRCP PVRAGADLIA
TRLQALLPMV QRLLAHTDAA QTVWTLEPDQ PHPVAARPQC PHCGTPGLMA LRQRERIAPV
PGTHAARADG GWRSVPAETT VQRLSQHVSP LTGVIARVTP LTAETDEALT IYRSEIFRTP
APGSTSLAGS GTQLCLGKGL SAVQARASAM CEAVERYAAF HQGDEAVVIA PAAELDAPCI
APTELARFSE RQTAGFATDK PPHAVAPSTG QGEPLWWAPA WSLTADARRY LPLAFCLAHA
PAQSQYHVGW TSNGCAAGNT REEAILQGFM ELVERDAAAI WWYGQIRRPA IALQGIDQAT
RQRLDRSCGP QWSYWLLDIT HDFGIPVVVS VGRHADTGQW AVGFGCSLDR ALACERALTE
ISQLIAAGKS FAVPEPLQAF LHPADSADAP PQQPASLSGH TPDTTPPDIA QAIARCVDIA
RGLGLETIVY DYSRPDIPVH TVKIVIPGLC HIWPELGNPR LRNVPVALGW HSRPLQESEL
NPLALYV
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