Gene Daci_4361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4361 
Symbol 
ID5749949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4775476 
End bp4776483 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content66% 
IMG OID641299464 
Producthypothetical protein 
Protein accessionYP_001565377 
Protein GI160899795 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.459389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA GCGCCTTCAG CATCAATCGC CGCCAGGCGG GCCTCGCCCT TGGCGCCCTG 
GCCCTGGGCG CGCTGGCGCC CGCGCGTGCC CAGTCGGGTG CCGCCGCCAA CTGGCCCACC
AAGCAGGTGC GCATCATCAA TCCGTTCCCC GTGGGCGGCG GTCCGGACGG CACTTCGCGC
CTGGTGGCCG ACAAGCTGGC GCGCCTGTGG AACCAGCCCG TCATCGTGGA AAACCGCCCC
GGTGGCAACG GCTTCATCGC CATCGAGGCC TTCAAGCGCG GCGCCACCGA CGGCACGGAC
ATCATCCAGC TGGACAACGT CCACCTGGCC GCCTATCCCC ACCTGTTCAA GAAGCTGCCC
TACAACATCG ACAAGGACTT CGAGGTCGTC CTGCCGCTGT TTCGCACCTT CTTCTTCGTC
TGCGTGCCGG TCAACAGCCC CTACAAGACC GTGGCCGACC TGATTGCCGA CGCCAAGGCG
CGCCCCGGCA AGCTGAACTA CGGCTCGTGG TCCGTGGGCA ATCCGGTGCA CCTGGGCTCG
GCCCTGCTGG AGTCGCTGAC GGGCACCAAG ATGGAACACG TCATCTACAA GGAAACCAGC
CAGCTGTACA CCAGCGTGGC CACGGGCGAG CTGGCCTTTG CGCTGGGCTC CTCGGGCACG
GCCGGCCCGC TGATGCGTTC GGGCAAGCTG CGCTTCCTGG CCGTGCTGGC ACCCCACCGC
CTCAAGGGCT ACGAGGATGT GCCCACCGTG GCCGAATCGG GCGGCCCGGC CGATGCCGTG
GTCACCGGCT GGAATGCCTT TGCCGTCTCC AAGTCCACGC CGCCCGCCGT GGTCGAGAAG
ATCCGCCAGG ACACCATGAA GGCTCTGCGC GAGCCCGACA TCCAGCCCAA GTTCCAGACC
TTCGGCTACG AGAACTACTT CCCCACGCCC GAAGAGTTCA AGGCCTTCAT CGTCGAAGAG
AACAAGCGCT TTGGCGACGT GATCCGCCGC GCCAAGATCG AGCTGTAA
 
Protein sequence
MKDSAFSINR RQAGLALGAL ALGALAPARA QSGAAANWPT KQVRIINPFP VGGGPDGTSR 
LVADKLARLW NQPVIVENRP GGNGFIAIEA FKRGATDGTD IIQLDNVHLA AYPHLFKKLP
YNIDKDFEVV LPLFRTFFFV CVPVNSPYKT VADLIADAKA RPGKLNYGSW SVGNPVHLGS
ALLESLTGTK MEHVIYKETS QLYTSVATGE LAFALGSSGT AGPLMRSGKL RFLAVLAPHR
LKGYEDVPTV AESGGPADAV VTGWNAFAVS KSTPPAVVEK IRQDTMKALR EPDIQPKFQT
FGYENYFPTP EEFKAFIVEE NKRFGDVIRR AKIEL