Gene Daci_4346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4346 
Symbol 
ID5749934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4758793 
End bp4759071 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content65% 
IMG OID641299449 
Producttransglycosylase-associated protein 
Protein accessionYP_001565362 
Protein GI160899780 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0134878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCC TCATCTGGCT GATGGTGGGT GGCCTGGTCG GCTGGATTAC CAGCATGGTC 
ACGAACACCC AGGCCGAGCA AGGCATTTTG CTCAACGTGG TCATAGGCGC CATTGGCGCA
CTGCTGGGCG GCTGGCTGCT GGCGCCGCTG CTGGGGCCTT CGGCCATGAA TGCGCAGACG
GAGGCGCCGG CCACCTCCAT GTCCATCTTC GTCTCTCTGG CCTGCGCCGT TGCGCTGCTG
GCCATCTTCA ACCTGTGCAA GCCGAGCGTG CCGCGCTGA
 
Protein sequence
MDFLIWLMVG GLVGWITSMV TNTQAEQGIL LNVVIGAIGA LLGGWLLAPL LGPSAMNAQT 
EAPATSMSIF VSLACAVALL AIFNLCKPSV PR