Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4299 |
Symbol | |
ID | 5749887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4704573 |
End bp | 4705586 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641299402 |
Product | regulatory protein MerR |
Protein accession | YP_001565315 |
Protein GI | 160899733 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0130356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGAC GTTTTGTCCC CTTCAGATCA ATGACGCCAC TTTCTGACCC CTTGCCTTTG GCGCCTGGCC CCGGGCTGCC CATCTCGGCC GTCGAACGCG AGACCGGACT TGCCAAGGAC ACCCTGCGTG TCTGGGAAAG ACGCTACGGC TTTCCAAGGC CTGAACGGGA TTCGGCCGGC GATCGCCGCT ATCCGGCAGA CCAGGTTCGA CAACTGACCC TGATCCGGCG GCTCATGGAT ACGGGGCTGC GCCCCAGCAA GCTGATGGGC GTGGATCTGG ACGGCCTGCA GGCGCTGCTG GCCCGCGCCG ACACCTCGCC GGGCAAGGAT TTGTCCAGGA CAAATTCAGA GAATGCAGCG GACTATGACC GCTTCGCCCC CATGCTCAAC GCCATTGCCG CACATGATCC CGCCCAGCTC AGGCATTGCC TGAGCCTGGC CCAGTCGCGC ATGGGCCTGG CCGGTTTCGT GACCACGCTC GTGGCCCCGC TGACCACGGC GGTCGGCGAT TTCTGGGCAC AGGGGCGTTT TGAAGTGTTC GAAGAGCACC TGTACACCGA GGTGCTCACC GGCGTCTTGA GGCAGGCGAT CGTCTCGCTC GCCCCTCCTT CCCCGCCGTC CGTGCCCAAG GTGTTGCTGA CCACGCTGCC GCAGGAGATG CATGGTCTGG GACTGCTCAT GGTCGAAGCC CTGCTGGCCC TGGAAGGCTG CAACTGCGTA TCGCTGGGCA CCCAGACGCC CATCGGCGAC GTGGCACAGG CCGCGCGGGC GCATCGCGCC GACATCGTGG GGCTGAGCTT CAGCAGCTCG CACAACGGAG CGATGGCGCA GGCTTGCCTG GGCGAGCTGC GCAGCCACCT GCCGCCGGCC ATCGAGTTGT GGGCCGGTGG AGCATGCCCG GCGCTTTATT CCAGCCCGGT CGCGGGCATC ACGCCGGTGC GCCATCTCAC GGATCTGCAA CCGCTGGTCG CCCGATGGCG GCAGACGACA AGAACACCAA GGACATCCGC ATGA
|
Protein sequence | MTGRFVPFRS MTPLSDPLPL APGPGLPISA VERETGLAKD TLRVWERRYG FPRPERDSAG DRRYPADQVR QLTLIRRLMD TGLRPSKLMG VDLDGLQALL ARADTSPGKD LSRTNSENAA DYDRFAPMLN AIAAHDPAQL RHCLSLAQSR MGLAGFVTTL VAPLTTAVGD FWAQGRFEVF EEHLYTEVLT GVLRQAIVSL APPSPPSVPK VLLTTLPQEM HGLGLLMVEA LLALEGCNCV SLGTQTPIGD VAQAARAHRA DIVGLSFSSS HNGAMAQACL GELRSHLPPA IELWAGGACP ALYSSPVAGI TPVRHLTDLQ PLVARWRQTT RTPRTSA
|
| |