Gene Daci_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4263 
Symbol 
ID5749851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4666845 
End bp4667729 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content75% 
IMG OID641299366 
Producthypothetical protein 
Protein accessionYP_001565279 
Protein GI160899697 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.444391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.375648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CCCACGCCTC CCAAACTGCG CAGCCCGCCC TCATGGCGGG CGCGGCGCGT 
GTGCTGCCTC AGTTGCAGGG CGTGTGGCGT GGCGATGGCT GGCAGCAGGC GCTGCAGCAG
CGCGTTCAGC CTTCGGGCCA TGCGCTGCTG GATGCGCAAT TGCCGGGCGG GGGCTGGCCG
CTGGGTGCCA TGGTCGAGCT GCTGCAACCC GCGCATGGCC ATGCCGAGTG GCCGCTGCTG
CTGCCGGGCC TGGCGGCCCT GATGCAGCGC AGCGCGGGCC AGGTGGTGCT GGTGGCGCCG
CCTTGCAGGC CTTTTGCACC GGGGCTGGAA GCGGCAGGCG TGGCGGCGCA CCGGCTGTGC
TGCGTGGAGG CCGACACCCA CCCGGGCGCC CACCCCGGCG CCCACCCGGC AGGCGATGGG
GCAGGGCTGG CCTGGGTCTG TGAGCAGGCA CTGCGCTGCC GCGACGTGCT GGCCGTGCTG
GCCTGGCTGC CAGCCGGTCT GCCCATGGCC ACGCTGCGCC GGCTGCAATG GGCGGCCGCT
GCGCAGGGGC GCATTCTGTG GCTGTGGCGC GAGGCCTCGG CCGCCCTGCA GACGGTGGCC
TCGCCCGCGC CGCTGCGGCT GCGCGTGGAG ACAGAGTTGG GGGAGCCGGG CGAAGGCGGC
ACGCCAGCCT GCCTGCGCGT GCAGTTGCTC AAGCGCCGGG GGCCTGCGCT GGAGCATCCC
TTGAAGCTGC CCCTGCACCA CTGGGCCTGG CAGGACGTGC TGCAGGCCCA GGCCCAGCGG
CGCACCCGGC AGGCGGACGA GGCGCAGCGC TGGCTTCATG GACACGGGCA ACTGCTGCCC
GCCGAGGCGC CCGCCCTGCA GGCGGCAGCG CATACCCTGG GGTGA
 
Protein sequence
MTTPHASQTA QPALMAGAAR VLPQLQGVWR GDGWQQALQQ RVQPSGHALL DAQLPGGGWP 
LGAMVELLQP AHGHAEWPLL LPGLAALMQR SAGQVVLVAP PCRPFAPGLE AAGVAAHRLC
CVEADTHPGA HPGAHPAGDG AGLAWVCEQA LRCRDVLAVL AWLPAGLPMA TLRRLQWAAA
AQGRILWLWR EASAALQTVA SPAPLRLRVE TELGEPGEGG TPACLRVQLL KRRGPALEHP
LKLPLHHWAW QDVLQAQAQR RTRQADEAQR WLHGHGQLLP AEAPALQAAA HTLG