| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4248 |
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| Symbol | |
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| ID | 5749836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4648874 |
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| End bp | 4650067 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299351 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001565264 |
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| Protein GI | 160899682 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0400018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0754484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACT CCGAAAATTC CAATGGCGGC ACGGCCGCCT CTGCCTCGCC TGCGCCGGCT
CCCGCTGCGG CGCCATCGCC TTCGCCTTCG CCCAAGCTCA TCAAGCCCTC GCTGCGCAGC
GTGCTGGTGA TGCTGGTGGT CGCACTGGCC GGCGTGCTGC TGGTGCTGCG TGCCTGGAAC
CTGTTCCCCT TCGCGGGCAC CGTGGTCAGC ACCGACAACG CCTATGTGCG CGGTGCCGTC
ACCGTGCTTG CGCCCCAGGT CAGCGGCTAT GTGACCGAGG TGCTGGTGCA GGACTACGAG
AACGTCAAGG CCGGCCAGCC CCTGGTGCGC ATCGACGCCC GCACCTACGA AGCCGCCCAG
GCACAGGCCC AGGCCCAACT GGCCAATGCC CGCGCACAGC TGGCCAATGC CGACCAGACC
CAGGCCCAGA ACCGCGCCAC GCTGGGCGCC AGCCGCGCCG GCCTGGCGGC GGCGCAGGCC
GAATCCGACC GCGCCGCGGC CGAGCTGCAG CGCGTGCAGG CGCTGTCCGA GCGCGGCTCC
GTCTCGCTCA ACGAGCGTGA CAAGGTGCGT GCCACCGCGC GCCTGGCGGC CACCAACGTG
GCCAAGGCCC AGGCCGACAT CGAGATCAAC GCCCAGAAGA TCAAGGCCAC GACGGTGAAC
CGCGCCTCGC TCGAAGCCCA GGTCCAGATG GCCGAGGCCC AGCTGCGCCA GGCCCAGATC
AACCTGGACA ACACCGTGGT GCACGCGCCC GGCGATGGCC AGGTCAGCGA AGTCGGCGTG
CGCCGGGGCC AGTACGTCAC GGCCGGCTCC CAGCTCATGT ACGTGGTGCC GCATACGCTG
TGGGTGGTGG CCAACTTCAA GGAAACCCAG ACCGCCCAGG TGCGCATAGG ACAAGCTGTG
CGCTTCAGCG TCGATGCGCT GGGCGGCGCC CACCTCACGG GCCGCGTGCT GGAGATCGCG
CCGGCCACGG GTTCGGAATT CAGTGTGCTC AAGGCCGACA ACGCCACGGG CAACTTCACC
AAGGTCGTGC AGCGCCTGCC GGTCAAGATT GCAATCGATC CCGACCAGGA GCTGGCCGCG
CGGCTGCGCG CGGGCATGTC GGTGGTGGTG CGGCTGGATA CGGCGCAGCC TGAGCCCCAA
CCCGCACAGC AGCCCGCACA GCAGCCCGCA CCCCAACCGG AGGCCCGCCC ATGA
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| Protein sequence | MSDSENSNGG TAASASPAPA PAAAPSPSPS PKLIKPSLRS VLVMLVVALA GVLLVLRAWN
LFPFAGTVVS TDNAYVRGAV TVLAPQVSGY VTEVLVQDYE NVKAGQPLVR IDARTYEAAQ
AQAQAQLANA RAQLANADQT QAQNRATLGA SRAGLAAAQA ESDRAAAELQ RVQALSERGS
VSLNERDKVR ATARLAATNV AKAQADIEIN AQKIKATTVN RASLEAQVQM AEAQLRQAQI
NLDNTVVHAP GDGQVSEVGV RRGQYVTAGS QLMYVVPHTL WVVANFKETQ TAQVRIGQAV
RFSVDALGGA HLTGRVLEIA PATGSEFSVL KADNATGNFT KVVQRLPVKI AIDPDQELAA
RLRAGMSVVV RLDTAQPEPQ PAQQPAQQPA PQPEARP
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