| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4246 |
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| Symbol | |
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| ID | 5749834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4644222 |
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| End bp | 4647422 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299349 |
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| Product | molydopterin dinucleotide-binding region |
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| Protein accession | YP_001565262 |
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| Protein GI | 160899680 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.146983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA AGAAGAAACT CCCCCAAGCT CCCGAAGATT CCCTGGATGC CGAGGCCGCC
CGCCGCCGCC TGCTGCTGCG CGGCGGACTC ACCGCCGGTG GGCTGGCCGC CTTCGCGGCC
GGCTACGGGG AAACACTGGC GCGCGGTGCC AAGGGCCTGG TCGCAGGCAC CTCGGGCACG
CCCACGGCCA GCGCCACGCG CGGCAATTCG CTGACGCCCG AGTTCCGCAT CGACCCGGCC
ACGGGCGCGC TCGCCACCCA GCCCGGCCAG GTGGTCAGCC CCTCCAGCTG CCTGGGCTGC
TGGACGCAGT GCGGCGTGCG CGTGCGTGTC GATACCGCCA GCAACCGCAT CCTGCGCGTG
GCAGGCAACC CCTACCACCC GCTGGCCACC ACGCGCCCTG CCGCCATGGA AGAACCCGTG
CGCGAGGTCT ACGCCAAACT GGGCAAGGAG CTGGGCCTGG AGGGCCGGGC CACGTCCTGC
GCGCGCGGCT CGTCCATGCT GGAGCACCAA AGTGCGCCGC ACCGCGTGCT CACCCCGCTC
AAGCGCGTGG GCCCGCGCGG CAGCGGTCGC TGGCAGAGCA TTTCCTTCGA GCAGCTGGTG
CAGGAAGTCT GCGATGGCGG CGATCTGTTC GGCGAAGGCC AGGTCGAGGG CCTGCGCGCC
ATCTGGGACA CCAAGACGCC GCTGGACGCC GACAACCCCG AGTTCGGTCC GCGCTCCAAC
CAGTTGCTGG TGACCGACGC CTCCAACGAA GGCCGCGCCC AGCTGCTGCG CCGCTTTGCA
GGGCCGTCCT TCGGCACCGT GAACGTCAGC AACCACGGCG CCTACTGCGG CCAGAGCTTT
CGCGTGGGCG CGGCAGCGGC CCTGGGCGAC CTGCCCGGCA TGCCGCACGG CAAGCCCGAC
TGGAGCCATG CCAGCTTCGG CCTGTTCATC GGCGCGGCAC CCGCGCAGTC CGGCAACCCC
TTCCAGCGCC AGGGCCGCGA ACTGGCCGAG GCCCGCTCGC GCGAGGACAA CCGTTTCCGC
TACGTGGTGG TCTCGCCCGT GCTGCCGACC TCGTCCAGCC TGGCTGCCGG CAGCGGCAAC
CGCTGGCTGG CCGTCAAGCC GGCCAGCGAC CTGGCTCTGG CCATGGCGCT GATCCGCGTC
ATCCTGGACG AGGCACGCCA TGACACGGGC TTTCTCGCCC AGCCCGGCCC GGCCGCCATG
CAGGCGGCGG GCGAGGCGTC CTGGAGCAAT GCCACGCACC TGCTGGTCAA CGAGCCCGGC
CACCCGCGCC ATGGCAGCTT TCTGCGTGGC GCCGACCTGG GCTGGGCCCT GCCCGCGCCA
GCCGAAGACG GCAAGCCGTC CCAGGATGTG TTCGTGGTGC AGCGTGCCGA TGGCAGCCTG
GCGCCGCACA CCCAGGCCGA GCCTGCACAG CTGATGGTGC GCACCCGCGT GGCGGTGCCC
GGCCTGAAGG CCGAAGGCGC GGACCAGGCC CCCGAGCTGT CGGTCTGCTC CTCGCTGGCC
AAGCTGCATG AGCAGGCCAG CCTCAAGACA CTGGACGAGT ACGCGGCGCT GTGCGGCGTG
GCGCGCGGCG AGATCGAGGC GCTGGCGCGC GAGTTCACCA GCCATGGCAA GCGCGCCGTA
GCCGATGCGC ATGGCGGCAC CATGAGCGGC GCGGGCTTCT ACACCGCCTA CGCCATCAGC
ATGCTCAACA CCCTGGTGGG CAACCTCAAC GTGCAGGGCG GCCTGGTGCT GGATGCCGGC
CCGTTCGGCC CCTTCGGCCC GGGCCCGCGC TACGACTTCG CCAACTTCGA CGGCAAGGTC
AAGCCGCGCG GCCTGGCGCT GTCACGCCAC CGCCAGCCCT ACGAGAAAAG CGCGGAATTC
CAGCGCAAGC GCGAGGGCCA GCCCGAGGGC GCGAAGGACT ACCCCGCCGC CCAGGCCCCG
TGGTACCCGG CCGTGGGCGG CCTGTCCAGC GAGATGCTGG CCAGCGCGCT GGCCGGCTAC
CCCTACCGCG CCAAGGCCTG GATCAACCAC ATGAGCAACC CCGTCTACGG CATTGCGGGC
TTTCGCAACG CGCTGGTGGA CGATCTCAAG GACCCGAAGA AGCTGCCCCT GATCGTCTCC
ATCGACCCCT TCATCAACGA GACCAGCGCG CTGGCCGATT TCATCGTGCC CGATACCGTG
ACCTACGAGA GCTGGGGCAT CTCGGCGCCC TGGGCCGACG TGGTGGCCAA AAGCTCCACC
GTGCGCTGGC CCGTGGTGCA GCCCGCCGTG GCGCGCACGG CCGGCGGCCA GCCCGTGAAC
GTGGAGAGCT TCCTCTTCGC CGTGGCAGAA CGGCTGGGCC TGCCCGGCTT TGGCGAGGCC
GCCATCAAAG ACGCCCAGGG CCAGCCCCAT GCGCTGCGCT CGGCCGAGGA CTTCTTCATC
CATGCACTGG CCAACGTGGC CTGGGCAGGC GGCAAGCCCG TGCCGGCGGC CAGCGATGAC
GACATCGCCA TCACCGGCGT GGACAGGCTG GTGCCCGCGC TGCGCCAGCG CCTGAAGGAC
GATGAATGGC GCCAGGTGGC CATGCTGCTG ACGCGCGGCG GGCGCTTCGA CCGCATCGAG
GACGCCTGGA AGGACGGCCA CACCCGCAAG GCCCACGCGC CTGCCCTGCA GGTCTGGAGC
GAGGAGCTGG CCCGCATGCG CCACGCCATG ACGGGCGAGC GCTACAGCGG CTGCCCCACC
TGGTATCCGG CGCGGCTGGC CGACGGCAGC GCCATGCGCA CGCATTTCGG CGAGCAGCAA
TGGCCGCTGC TGCTGACCTC GTACAAGTCC AACCTGATGA GTTCCATGTC GATTGCCGTC
TCGCGGCTGC GCCAGGTGCA TCCGCACAAC CCGGTGTCCC TGCACCGCGA TGACGCCGAG
CGGCTGGGCA TCGCCAACGG CGACACGGTG CGCATCCGCA CGCCGGGCGG CGCGGTGACG
GCCGTGGCCA TGGTGCGCGA CGGCGTGATG CCGGGCACCG TGGCCATCGA GCACGGCTAC
GGCCACCGCG AGCTGGGCGC GGGCCGCCAC AGCATCGACG GCCAGCCCAT GCCGGTGAAC
GCCGAGCATG CCAATGGCGT GAACCTCAAC GACCTGGGCT TTGCCGATCC CACGCGGCCC
GGCTGCAAAA ACGTGTGGGT GGACTGGGTG TCCGGCGCCA CGGTGCGCCA GGGCCTGCCT
GCGCGCATCG AGAAGGTCTG A
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| Protein sequence | MTDKKKLPQA PEDSLDAEAA RRRLLLRGGL TAGGLAAFAA GYGETLARGA KGLVAGTSGT
PTASATRGNS LTPEFRIDPA TGALATQPGQ VVSPSSCLGC WTQCGVRVRV DTASNRILRV
AGNPYHPLAT TRPAAMEEPV REVYAKLGKE LGLEGRATSC ARGSSMLEHQ SAPHRVLTPL
KRVGPRGSGR WQSISFEQLV QEVCDGGDLF GEGQVEGLRA IWDTKTPLDA DNPEFGPRSN
QLLVTDASNE GRAQLLRRFA GPSFGTVNVS NHGAYCGQSF RVGAAAALGD LPGMPHGKPD
WSHASFGLFI GAAPAQSGNP FQRQGRELAE ARSREDNRFR YVVVSPVLPT SSSLAAGSGN
RWLAVKPASD LALAMALIRV ILDEARHDTG FLAQPGPAAM QAAGEASWSN ATHLLVNEPG
HPRHGSFLRG ADLGWALPAP AEDGKPSQDV FVVQRADGSL APHTQAEPAQ LMVRTRVAVP
GLKAEGADQA PELSVCSSLA KLHEQASLKT LDEYAALCGV ARGEIEALAR EFTSHGKRAV
ADAHGGTMSG AGFYTAYAIS MLNTLVGNLN VQGGLVLDAG PFGPFGPGPR YDFANFDGKV
KPRGLALSRH RQPYEKSAEF QRKREGQPEG AKDYPAAQAP WYPAVGGLSS EMLASALAGY
PYRAKAWINH MSNPVYGIAG FRNALVDDLK DPKKLPLIVS IDPFINETSA LADFIVPDTV
TYESWGISAP WADVVAKSST VRWPVVQPAV ARTAGGQPVN VESFLFAVAE RLGLPGFGEA
AIKDAQGQPH ALRSAEDFFI HALANVAWAG GKPVPAASDD DIAITGVDRL VPALRQRLKD
DEWRQVAMLL TRGGRFDRIE DAWKDGHTRK AHAPALQVWS EELARMRHAM TGERYSGCPT
WYPARLADGS AMRTHFGEQQ WPLLLTSYKS NLMSSMSIAV SRLRQVHPHN PVSLHRDDAE
RLGIANGDTV RIRTPGGAVT AVAMVRDGVM PGTVAIEHGY GHRELGAGRH SIDGQPMPVN
AEHANGVNLN DLGFADPTRP GCKNVWVDWV SGATVRQGLP ARIEKV
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