Gene Daci_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4240 
Symbol 
ID5749828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4639241 
End bp4640239 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID641299343 
Productredoxin domain-containing protein 
Protein accessionYP_001565256 
Protein GI160899674 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0223129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.219177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTCC GGTCATCCCC TCTTCTTTCG TCCTTCCTGC CCTTGCTTGC CGGCCTGCTG 
CTGGCGCCTT CGCCTGGTCT TGCCGGACCG GCAGAGCCTG GCGGGCCGTC AGCGCTATCG
GCGCTGGGCG CCTGGCTGCA CCTGCCTGCC AGCCTGGCGC TGGGCCCGCT GGTCCTGCCG
ATGGGCGTGG TGGTGGCCAT GCTGGCCTGG CTGCTGGCGC AGTGGCTGGC GCGCAGGAAT
GAAAGGCGCA CGGGCCAGGC CGTGGATGCG CTGCTGTGGC AAAGCACCCT GGCCGGCCTG
CTGGCGGCGC GCCTGGCCTA TGTCGCGCAG TGGTGGACCG AGGTCGCGCC GGCCCCCTGG
GATTGGAGCG GGATGCCGGC CTTCGCAGGC CGTGTCGTCG ATATCCGCGA CGGGGGATGG
AACCTCTGGG CCGGCCTGCT GGCCGCGCTG CTGTACATGC TGTGGCGCAG CCGCCGCTCC
CCGGTGCTGC GCCGCGCCAC AGGGCTGGCG CTGGGCGCGG GGGCTGCCCT GCTGGTGCCG
GGCAGCCTGC TGCAGGCGCT GCCCTCCGCA GATGCACCGG CCCTGCCGGC CTTCACCCTG
GTCAACGGGC AGGCGCAGCC GGTCTCGCTG CAGCAGCTGC AGCAGGCCGA TGGCAAGCCC
ATGGTGATCA ACCTCTGGGC CACCTGGTGC CCGCCTTGCA GACGCGAGAT GCCGGTGCTG
GCCCAGGCCC AGCAGCAGCG GCCCGATGTG CGCTTCATCT GGATCAACCA GGGCGAGTCA
GCCGAGGCCG TGACGGGCTA CCTGCGGCGC GAGCAGGCAG CAGCCCCGCT GCCGCTGGCC
CAGGTGCTGT TCGACCCGCA GCAGCAGGCC GGCCGGCACT GGCGCCAGCG GGGCCTGCCT
TCCACCTATT TCTATGGCGC CGACGGCCGG CTGTGCGGCA TGCGCATGGG CGAGCTGTCG
CGCGCCAGCC TGGCCCAGCA TCTGAAGGAA TGTTCATGA
 
Protein sequence
MHLRSSPLLS SFLPLLAGLL LAPSPGLAGP AEPGGPSALS ALGAWLHLPA SLALGPLVLP 
MGVVVAMLAW LLAQWLARRN ERRTGQAVDA LLWQSTLAGL LAARLAYVAQ WWTEVAPAPW
DWSGMPAFAG RVVDIRDGGW NLWAGLLAAL LYMLWRSRRS PVLRRATGLA LGAGAALLVP
GSLLQALPSA DAPALPAFTL VNGQAQPVSL QQLQQADGKP MVINLWATWC PPCRREMPVL
AQAQQQRPDV RFIWINQGES AEAVTGYLRR EQAAAPLPLA QVLFDPQQQA GRHWRQRGLP
STYFYGADGR LCGMRMGELS RASLAQHLKE CS