Gene Daci_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4221 
Symbol 
ID5749809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4622382 
End bp4623527 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID641299324 
Producthypothetical protein 
Protein accessionYP_001565237 
Protein GI160899655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0716208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.290743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCA TCCGTCCTCT GCGCTCCCTG CTTTTGCTGT TTCTGGCGAT CTCGGTCGAG 
GCGCTGGCGC AAGCGCCATC TCCCGAACCT GTCACCGCCG ATGCTTCCGT TTGCAGGCAC
CGGGCCGACA CCGCCTGCCT GCAATCCTTC AACCTGCCCG GCAACGCGGG GCGCATGCGC
TACTACGCAT CGCAGGCGCC GGTGGCCAGC AACGGCGCCA TGCCCCGGTC CGCGCTGTTG
GTGATGCACG GGCATCCACG CGATGCCAAC CGCAGCTTCG AGGCCGGCCT GCGGGCCGCC
GAAGGCGCAC AGCGGCTGCA GGACACCCTG GTCATCGCCC CGCTGTACCA GGTGCCCGAG
GACCAGGCTG CGCATTGCCA CAGCCGTGGC GTGCCCGCAG CCGGGAACGC AGACGCGGTA
TGGACCTGCG CGGGCTGGCT GGCCGGCGAG CCCTCGCTGG GGCCGCATCC GATAGGTTCT
TTCGCCGCGC TGGATGCGCT GGTGGCCGAG CTCGTGCAGC GCTGGCCCGG CCTGCGCAGC
GTGACCCTGG CGGGGTTTTC GGCTGGGGCG CAGATGCTGC AGCACAGCGT GGCCTTTGCA
GCCGATGCGC CGGGTTCCGT GACCTTGCGC TACGTGATCG CCGATCCGGG CACCTGGCTG
TATTTCGATC CCGTGCGGCC ACAGCCGAAG ATAGCCGGGC AGAGCACCGA CTGGGCAGCC
TGCGGCACAG GCGCGGCGTT TCCGGGAGCG TGCAGCTATG TCTTCCATGC GCCGCCCGCA
GCCAGCGCCT GCCCGGGCCA TGACCGCTGG AAGTACGGCC TGCAGGACCT GCCCGGCCAC
CTGGGGCGCG ATGCGGCTGC CGCGCGGGCC CGCTATGCGG CCGCGCAGAT CGACTACCTG
GAAGGCGCCC TGGACAGCAG CGCGGACAAG GGCGCGTTCT ATCCCATCCT CGACAAGTCC
TGCGCCGCCA TGCTGCAAGG CCCGTTCCGG CTGCAGCGAG GCCACGCCTT CGCGGCCTAC
GAGCGCGAGC TGCTGGCGCC GCAGCGGCCA CGCCGCTTCG TCGTGGTGCC GGACTGCGCC
CATGATGTGG CTTGCGTGCT GCCGTCCCTG GCCGCGCGGC CCCTGCTGTT TCCACCAGCG
CCCTGA
 
Protein sequence
MPSIRPLRSL LLLFLAISVE ALAQAPSPEP VTADASVCRH RADTACLQSF NLPGNAGRMR 
YYASQAPVAS NGAMPRSALL VMHGHPRDAN RSFEAGLRAA EGAQRLQDTL VIAPLYQVPE
DQAAHCHSRG VPAAGNADAV WTCAGWLAGE PSLGPHPIGS FAALDALVAE LVQRWPGLRS
VTLAGFSAGA QMLQHSVAFA ADAPGSVTLR YVIADPGTWL YFDPVRPQPK IAGQSTDWAA
CGTGAAFPGA CSYVFHAPPA ASACPGHDRW KYGLQDLPGH LGRDAAAARA RYAAAQIDYL
EGALDSSADK GAFYPILDKS CAAMLQGPFR LQRGHAFAAY ERELLAPQRP RRFVVVPDCA
HDVACVLPSL AARPLLFPPA P