Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4205 |
Symbol | |
ID | 5749793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4605537 |
End bp | 4607522 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641299308 |
Product | DNA methylase N-4/N-6 domain-containing protein |
Protein accession | YP_001565221 |
Protein GI | 160899639 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2189] Adenine specific DNA methylase Mod |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0188789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0659615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAC TCACGGCAGC CAGCCCCGAA GCCCAGTCCG CCGACTTGGT GGCGGCAAAT ATCGAACAGC TCAAGGCCCT GTTCCCGGAA TTGATTACCG AAGGCGCGGA CGGCGTGGCG GTGAATGTGG ACGTGCTCAA GGCGTTGGTG GGTGATGCCA GCGTGACCGA CGCCGATGAG AAGTACGGCC TCAACTGGCA CGGCAAACGC CGCGCGCGGC AACTGGCGCT GACGCCCAGC ACCGGCACCT TGCGCCCCTG CCCGGAAGAC AGCGTGGACT GGGAGACCAC CCAGAACCTG ATGATCGAGG GCGACAACCT TGAAGTGCTC AAGCTGCTGC AAAAGAGCTA TGCCGGCAAG GTTAAGCTGA TTTATATCGA CCCGCCGTAC AACACCGGCA AGGATTTTGT GTACCCGGAC AATTTTCAGG ACAACATCAA GAACTATCTG GAACTGACCG GACAGGTAGA AGGTGGGCAG AGAATTAGCA GCAATACCGA GGCCAGCGGG CGGTTTCATA CCGACTGGCT GAATATGATG TATCCACGAC TTAAGCTGGC AAAAAATCTT CTTCTCGATA GTGGATTAAT AATTATCTCC ATTGACTCTT CTGAAGCCAC TAACTTGCGG CTAATTATGG ACGAAGTTTT TGGTCAAGAG AACTTCATCG GCTTACTGCC GACTATCATG AATCTGAAAG GCAATAACGA TGCCTTCGCT TTCGCGGATA CTCATGAATT TACAGTTGTT TATGCTCGGA ATAAAGAAAA ATGTGTGGTT TTTCAACTTC CAGTGTCAGA GGAATCGCTA GATGATTGGC TGGAAGATGA GCGTGGCCTC TACAAGCGCG CTGACACTTT AAGGCGGACA GGGCAGGATG CATCGAGGGA GCGCCGTCCT AACGGGTGGT TTCCAGTCTT TATTGACGAA AAGGGTGAAG TCTACGCGAC GCTTGATGAT GAGCCTCGCT CAGGTTCAGA TTTAACTCTA TGGCCAGTTT CAGAGGCAGG CGAAGAGCTC TCTTGGACGT GGAGCAAAAA GAAAATAAAC GATGAAAACT TTAACTTGAT TGTTGTTGAA GGTAGGTCAG GAAAGAATAT CTACAAAAAA CAACGAGCCA CTCTCGGCGA CCTCCCAACC AGCAAGCCCA AATCGATTCT CTACAAGCCT GAGTACAGTA GTAGTAATGG AACGGCCGAA ATTTCATCGT TGCTGGGAAG CAATGTGTTC GATAGCCCTC CAAAACCTCG CTCATTAATT CGTGACTTTG TAACAATTGG TACGTCTCCT CAGGACATCA TTCTTGATTT CTTTGCTGGA ACTGGAACAA CTGGTCATGC AGTAATGGCA CAGAATTTCT TAGATGAAGG AAACCGTAGA TTTATTCTTG TTCAACTCCC CCAGTATCTC GATCCGGAGG ATAAGGGGCA GAAAAATGCA GCCGAATTCT GCGACCAGAT CACCAAGCCT CGTTCTATCG CAGAACTCAC TAAAGAGCGC TTACGCCGCG CAGGCACCAA GATTAAGGCT GAAAGCTCTG GCTGGCAGGG CGACACCGGC TTCCGCGTCT TCAAGCTCGA CACCTCCAAT ATCCGCGTCT GGAATCCCAA ACCAGACGAT CTGGAAGCCA CACTATTCGA CCATCAGGAT CATCTGCTCG AAGGTCGCAG CGAGGCTGAT GTGCTTTACG AACTGCTGCT CAAGTTGGGG CTGGATCTGT GTGTGCCCAT CGAACAGCGC AATATCGAAG GCCTTCACGT CCATGCCATT GGCGGCGGCG TGCTGCTGGC GTGCCTGGCT GAGACCATCA CCCGCGAACA GGTAGAGCCG CTCGCCCAGG GCATCATCGG CTGGCACAAG GCGTTGGCCC CTGCCGGTGA CACCACCTGC GTGTTCCGCG ACAGCGCCTT TGCCGATGAC GTGGCCAAAA CCAATCTCGC AGCCATTCTG GAGCAACACG GCATCCAGAA CGTGCGCAGC TTGTAA
|
Protein sequence | MEKLTAASPE AQSADLVAAN IEQLKALFPE LITEGADGVA VNVDVLKALV GDASVTDADE KYGLNWHGKR RARQLALTPS TGTLRPCPED SVDWETTQNL MIEGDNLEVL KLLQKSYAGK VKLIYIDPPY NTGKDFVYPD NFQDNIKNYL ELTGQVEGGQ RISSNTEASG RFHTDWLNMM YPRLKLAKNL LLDSGLIIIS IDSSEATNLR LIMDEVFGQE NFIGLLPTIM NLKGNNDAFA FADTHEFTVV YARNKEKCVV FQLPVSEESL DDWLEDERGL YKRADTLRRT GQDASRERRP NGWFPVFIDE KGEVYATLDD EPRSGSDLTL WPVSEAGEEL SWTWSKKKIN DENFNLIVVE GRSGKNIYKK QRATLGDLPT SKPKSILYKP EYSSSNGTAE ISSLLGSNVF DSPPKPRSLI RDFVTIGTSP QDIILDFFAG TGTTGHAVMA QNFLDEGNRR FILVQLPQYL DPEDKGQKNA AEFCDQITKP RSIAELTKER LRRAGTKIKA ESSGWQGDTG FRVFKLDTSN IRVWNPKPDD LEATLFDHQD HLLEGRSEAD VLYELLLKLG LDLCVPIEQR NIEGLHVHAI GGGVLLACLA ETITREQVEP LAQGIIGWHK ALAPAGDTTC VFRDSAFADD VAKTNLAAIL EQHGIQNVRS L
|
| |