Gene Daci_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4205 
Symbol 
ID5749793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4605537 
End bp4607522 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content52% 
IMG OID641299308 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001565221 
Protein GI160899639 
COG category[L] Replication, recombination and repair 
COG ID[COG2189] Adenine specific DNA methylase Mod 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0188789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0659615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC TCACGGCAGC CAGCCCCGAA GCCCAGTCCG CCGACTTGGT GGCGGCAAAT 
ATCGAACAGC TCAAGGCCCT GTTCCCGGAA TTGATTACCG AAGGCGCGGA CGGCGTGGCG
GTGAATGTGG ACGTGCTCAA GGCGTTGGTG GGTGATGCCA GCGTGACCGA CGCCGATGAG
AAGTACGGCC TCAACTGGCA CGGCAAACGC CGCGCGCGGC AACTGGCGCT GACGCCCAGC
ACCGGCACCT TGCGCCCCTG CCCGGAAGAC AGCGTGGACT GGGAGACCAC CCAGAACCTG
ATGATCGAGG GCGACAACCT TGAAGTGCTC AAGCTGCTGC AAAAGAGCTA TGCCGGCAAG
GTTAAGCTGA TTTATATCGA CCCGCCGTAC AACACCGGCA AGGATTTTGT GTACCCGGAC
AATTTTCAGG ACAACATCAA GAACTATCTG GAACTGACCG GACAGGTAGA AGGTGGGCAG
AGAATTAGCA GCAATACCGA GGCCAGCGGG CGGTTTCATA CCGACTGGCT GAATATGATG
TATCCACGAC TTAAGCTGGC AAAAAATCTT CTTCTCGATA GTGGATTAAT AATTATCTCC
ATTGACTCTT CTGAAGCCAC TAACTTGCGG CTAATTATGG ACGAAGTTTT TGGTCAAGAG
AACTTCATCG GCTTACTGCC GACTATCATG AATCTGAAAG GCAATAACGA TGCCTTCGCT
TTCGCGGATA CTCATGAATT TACAGTTGTT TATGCTCGGA ATAAAGAAAA ATGTGTGGTT
TTTCAACTTC CAGTGTCAGA GGAATCGCTA GATGATTGGC TGGAAGATGA GCGTGGCCTC
TACAAGCGCG CTGACACTTT AAGGCGGACA GGGCAGGATG CATCGAGGGA GCGCCGTCCT
AACGGGTGGT TTCCAGTCTT TATTGACGAA AAGGGTGAAG TCTACGCGAC GCTTGATGAT
GAGCCTCGCT CAGGTTCAGA TTTAACTCTA TGGCCAGTTT CAGAGGCAGG CGAAGAGCTC
TCTTGGACGT GGAGCAAAAA GAAAATAAAC GATGAAAACT TTAACTTGAT TGTTGTTGAA
GGTAGGTCAG GAAAGAATAT CTACAAAAAA CAACGAGCCA CTCTCGGCGA CCTCCCAACC
AGCAAGCCCA AATCGATTCT CTACAAGCCT GAGTACAGTA GTAGTAATGG AACGGCCGAA
ATTTCATCGT TGCTGGGAAG CAATGTGTTC GATAGCCCTC CAAAACCTCG CTCATTAATT
CGTGACTTTG TAACAATTGG TACGTCTCCT CAGGACATCA TTCTTGATTT CTTTGCTGGA
ACTGGAACAA CTGGTCATGC AGTAATGGCA CAGAATTTCT TAGATGAAGG AAACCGTAGA
TTTATTCTTG TTCAACTCCC CCAGTATCTC GATCCGGAGG ATAAGGGGCA GAAAAATGCA
GCCGAATTCT GCGACCAGAT CACCAAGCCT CGTTCTATCG CAGAACTCAC TAAAGAGCGC
TTACGCCGCG CAGGCACCAA GATTAAGGCT GAAAGCTCTG GCTGGCAGGG CGACACCGGC
TTCCGCGTCT TCAAGCTCGA CACCTCCAAT ATCCGCGTCT GGAATCCCAA ACCAGACGAT
CTGGAAGCCA CACTATTCGA CCATCAGGAT CATCTGCTCG AAGGTCGCAG CGAGGCTGAT
GTGCTTTACG AACTGCTGCT CAAGTTGGGG CTGGATCTGT GTGTGCCCAT CGAACAGCGC
AATATCGAAG GCCTTCACGT CCATGCCATT GGCGGCGGCG TGCTGCTGGC GTGCCTGGCT
GAGACCATCA CCCGCGAACA GGTAGAGCCG CTCGCCCAGG GCATCATCGG CTGGCACAAG
GCGTTGGCCC CTGCCGGTGA CACCACCTGC GTGTTCCGCG ACAGCGCCTT TGCCGATGAC
GTGGCCAAAA CCAATCTCGC AGCCATTCTG GAGCAACACG GCATCCAGAA CGTGCGCAGC
TTGTAA
 
Protein sequence
MEKLTAASPE AQSADLVAAN IEQLKALFPE LITEGADGVA VNVDVLKALV GDASVTDADE 
KYGLNWHGKR RARQLALTPS TGTLRPCPED SVDWETTQNL MIEGDNLEVL KLLQKSYAGK
VKLIYIDPPY NTGKDFVYPD NFQDNIKNYL ELTGQVEGGQ RISSNTEASG RFHTDWLNMM
YPRLKLAKNL LLDSGLIIIS IDSSEATNLR LIMDEVFGQE NFIGLLPTIM NLKGNNDAFA
FADTHEFTVV YARNKEKCVV FQLPVSEESL DDWLEDERGL YKRADTLRRT GQDASRERRP
NGWFPVFIDE KGEVYATLDD EPRSGSDLTL WPVSEAGEEL SWTWSKKKIN DENFNLIVVE
GRSGKNIYKK QRATLGDLPT SKPKSILYKP EYSSSNGTAE ISSLLGSNVF DSPPKPRSLI
RDFVTIGTSP QDIILDFFAG TGTTGHAVMA QNFLDEGNRR FILVQLPQYL DPEDKGQKNA
AEFCDQITKP RSIAELTKER LRRAGTKIKA ESSGWQGDTG FRVFKLDTSN IRVWNPKPDD
LEATLFDHQD HLLEGRSEAD VLYELLLKLG LDLCVPIEQR NIEGLHVHAI GGGVLLACLA
ETITREQVEP LAQGIIGWHK ALAPAGDTTC VFRDSAFADD VAKTNLAAIL EQHGIQNVRS
L