| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4194 |
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| Symbol | |
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| ID | 5749782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4589202 |
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| End bp | 4592582 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641299297 |
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| Product | AAA ATPase |
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| Protein accession | YP_001565210 |
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| Protein GI | 160899628 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0708139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC AGGACATTCC TGTCAACATC ATAACTGTCC GCATCAAGCG GTCTGACAAT
GTCGAAGCCC TGCAAGAGCA GCCAGTATTC TCGGTAGAGG CCAGCCTATC CCGCGCAGAT
GAATTTGAAA TCCGCCTGAG AGACGCGGTT GTTTTCGTTC GCCCCGTCGC GGCTGTTGAC
ATCCGCCGCC TCAACGCTGA ACTTGCCAGT GGGCGTTCCC TGCTTGCACA ACTTGAAAAC
CCTGCCGCCG ATGGCAGCAT CGAGCTGAAG ATCGGTTTTT TCACCGGCGT CTGCCTGGAA
ATGGGCGATG TTGAAATCGG TGTGGATGAG TATGTGCAAG AAAAGATGCG GACGAAGGGT
GAGGCACTTT ACAAGAGGCT GGGCGAACTT TGCTGCTTCC AACAGGGAAA CGACGCATTT
TTCTTCCTGA CTGCTGGCCC GGCGATTGAT GAAGAACTGA AACCTGTCGG CGAGGACACG
CCACGCGATG CAGCTGCGGA GCCGACCCGA ATAAACGCTT TCTGTGTTAC TGGCGAAGGT
ATCCGCTTCA TTGCCACCGA AAAAGCAATG CCAGGCGGCC AAACTATCTA CATCGCCACC
CGTCTAACCA AGCCAAAGAA GGAACCTGAC CGCACCTTAC GCCTGGCCAA AGGTCGGCTG
CGTTTTGTGG ACTGGACACA GGCGGGACAA GTGCAAATTC TTGCCAAAGC GCAAATGACA
GCACTCACTC AGGACGATGG AAGCTATCTG AAAAAGTGGG ACGAGTTTGG TGAGGTTGAA
GGTGAACTGC TGCTCAAGCA AGCACGCGAA GTGGGTGCTT TGCAATTCAC GGAGATGGTG
CCGAAACGGG ATGGAACTGT CGGAGTTCGT ATTGCGCAGG CATCAGATTC TGCGTGGGGC
GCACTGAGAC AAGGCGCAGT ACCTGAAGTT GAACTGGTGG ACGAGTTGCC GGACTACTTG
CAGGATGAAA ACCTGAGCTT CACGGATTTT GCGAGAGGGA TCGAAAAAAA GGAGGGGGAA
CACAGCAAGC TCGGTGAAAA ACGCGAGCTG CGCGAGAAAA ATACCTATTT CAGTGTCGCA
GAGTTTGACG AGGAAACTCG CGTACTCACG CTTAAAGCCG AGGCTCTACC CAAGGAATTC
GGCACGCTCA TCCTGTCGCT GGCGGGCGAA TCTGCTCAGA TCAAGCGCCG CATGGCCGCC
CGTCAAGCCA TTCTGGAAGG CCGTGCCGCC AACCCCCAGC TTGGGCTGTT GATTGAGGCG
CAGGGGCGAA TCACACAGAT CCGGCCATCG CAAAAAGTTC AACCGCTCAC GGCCTTCGTT
CGCAACAAGG TCTTTCGCAA TCCGCCCACC GTCATGCAGG AAAAGGCCAT CGAGGCCGCC
CTAAAAACGC CAGATATAGC GTTGATCCAA GGCCCGCCCG GTACCGGCAA GACCACCGTC
ATCGCTGCCA TTCTGGAGCG CCTGAACGAG ATGGCCGACA AGCGCGGCGC GAGCATCAAA
GGCCAAATTC TGTTGACAGG CTTTCAGCAC GATGCGGTGG AAAACATGAT CGAGCGGCTC
TCGCTCAATA GCCTGCCCGT GCCGAAATTC GGCAAACGGT CTGGCGCGAC GGAAGACGAT
CTCAGCACCT TCGAGCGCAA TCTTGAGGAT TGGTGTTCAA AGTTGGCCGC CGAACTACGT
GAACGAAACC CACAGATTGC CGAAGTTGAG CAGGAACGGG AAATAAAAAA CCTGTGCCTG
CAATATGTCC AAGCCCCGTC ACGCGTGCTG GCCGCCAGCC TTGCTAGGAA AATCGCAGCG
CTCGGCAGTG TAATTCTTGG CGAAGACGGC GCTCGACGGT CGACGAATTT GGCGAAAAAG
CTCGCGCACG AGGAAAACCT CAACGATGGC TCCACCCAAT GGCTTGATGC AGCGCGCCGT
CTGCGCGTTC GCCATGAAAG CTTTTCTGAC GACGGGCCAG AAAGGGCGAT GGACGCACTG
GATGACCTGC GTGATGTGCT TGAAGAAGAC GAACGCAAAC TGCTGGACAA AGCCAGTCTG
TGGCGCAATG AAGATGGCCC AGCGCCATTT TTGGACAACC TGGTCGCGTT GAAAAAGAGG
CTCCTCGCCC GGTTCACCGC TCCACCGATT CTTCGCGTGG AAAAGCAGAA CGACGCAGTG
CTTGCATTGG CAGAATTCGC CATACAACGC ATCAAAAACG CCGAGTATTC GGCTAAGGAT
AAAAAATCTG CTGCGCTGGC CGAGTTTCTA GCCGAACTGG AAGGCAACCC CTATGGCATG
GTAGATGCCC TGTCCGAATA CAGTTTTGCC TTTGCCGCCA CCAGCCAGCA GAGCGTCAAT
CGTGCAATGC AAAAACGCAA AGGGCTTGTC GGGCGCGATG TCAATCAAAA CCAGAAAGGC
ATGGAATACG AATATGTCAT CGTGGACGAA GCCGCCCGTG TCTCGCCTCG TGATTTGATG
GTGGCTATGG CGCAAGGCAA GCGCATTATT CTGGTCGGCG ACCATCGACA ATTGCCGCAC
ATCATTGACG AAGAGGTGGC TCGCCAGATG GAGGAAGGCG AAACGGGTGA GGACGAAAAT
GACTGGCTAA AAAAATCCAT GTTTCAGTAT TTGTTCTCCG AGCGTTTAAA AACACTGGAC
AAGAGCTTCC CAATTATCGA CAGCACCACT GGCCGCGTTA CACCACGTTG CATCACGCTG
GACAAGCAAT ACCGCATGCA TCCGCTGCTG GGCAGCTTTA TCAGTAGAAA TTTCTATGAA
CGCTTCGACC CGGAGGAGCA ATTTGGCTCC GGGCGACCAG CAAGCGATTT CGCCCATGAT
CTGCCAGGCA CGAACGGCAA GTCTGCCGTT TGGATGGATG TACCAGCACA AAGAGGAAAA
CATCAAAAGG ACGGAACCAG TTGGACGCGC CCCGCAGAAG TCACTGTCAT CGCTCGCCAG
TTACAGGCGT GGATGAGTTC GGATGCAGGG AAAGATCTCT CCTTCGGTGT TATTTCATTT
TATAAGGCGC AGGCCGACAG CATCAGGGAA CAACTCAAAA GGAAATTCGG CGGGATCGTG
AACGATGACA AGCAACTGCG TGTTGGAACG GTGGACTCTT TCCAAGGCAT GGAATTCGAT
GTCGTCTTCC TCTCAATGGT GCGAACCTTG CCGCAAAACT GGCAGCCAAA GGATGATGAC
CGCGACAAAC AAGCTAGAGC GCTGTTTGGC CATCTCTGTC TTTACAACCG TCTGAATGTC
GCCATGAGCC GTCAGAAGAA GCTGCTGGTG GTCGTTGGAG ATACGGGGTT GCTACAAAGT
GAACTCGCGA AGGAGTTCGT GCCTGGACTG GTGGATTTCC TTCAGATATG CCGCGAGCAA
GGGGTGATGC TGCCATGTTG A
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| Protein sequence | MKFQDIPVNI ITVRIKRSDN VEALQEQPVF SVEASLSRAD EFEIRLRDAV VFVRPVAAVD
IRRLNAELAS GRSLLAQLEN PAADGSIELK IGFFTGVCLE MGDVEIGVDE YVQEKMRTKG
EALYKRLGEL CCFQQGNDAF FFLTAGPAID EELKPVGEDT PRDAAAEPTR INAFCVTGEG
IRFIATEKAM PGGQTIYIAT RLTKPKKEPD RTLRLAKGRL RFVDWTQAGQ VQILAKAQMT
ALTQDDGSYL KKWDEFGEVE GELLLKQARE VGALQFTEMV PKRDGTVGVR IAQASDSAWG
ALRQGAVPEV ELVDELPDYL QDENLSFTDF ARGIEKKEGE HSKLGEKREL REKNTYFSVA
EFDEETRVLT LKAEALPKEF GTLILSLAGE SAQIKRRMAA RQAILEGRAA NPQLGLLIEA
QGRITQIRPS QKVQPLTAFV RNKVFRNPPT VMQEKAIEAA LKTPDIALIQ GPPGTGKTTV
IAAILERLNE MADKRGASIK GQILLTGFQH DAVENMIERL SLNSLPVPKF GKRSGATEDD
LSTFERNLED WCSKLAAELR ERNPQIAEVE QEREIKNLCL QYVQAPSRVL AASLARKIAA
LGSVILGEDG ARRSTNLAKK LAHEENLNDG STQWLDAARR LRVRHESFSD DGPERAMDAL
DDLRDVLEED ERKLLDKASL WRNEDGPAPF LDNLVALKKR LLARFTAPPI LRVEKQNDAV
LALAEFAIQR IKNAEYSAKD KKSAALAEFL AELEGNPYGM VDALSEYSFA FAATSQQSVN
RAMQKRKGLV GRDVNQNQKG MEYEYVIVDE AARVSPRDLM VAMAQGKRII LVGDHRQLPH
IIDEEVARQM EEGETGEDEN DWLKKSMFQY LFSERLKTLD KSFPIIDSTT GRVTPRCITL
DKQYRMHPLL GSFISRNFYE RFDPEEQFGS GRPASDFAHD LPGTNGKSAV WMDVPAQRGK
HQKDGTSWTR PAEVTVIARQ LQAWMSSDAG KDLSFGVISF YKAQADSIRE QLKRKFGGIV
NDDKQLRVGT VDSFQGMEFD VVFLSMVRTL PQNWQPKDDD RDKQARALFG HLCLYNRLNV
AMSRQKKLLV VVGDTGLLQS ELAKEFVPGL VDFLQICREQ GVMLPC
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