| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4179 |
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| Symbol | |
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| ID | 5749767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4568705 |
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| End bp | 4571614 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299282 |
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| Product | hypothetical protein |
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| Protein accession | YP_001565195 |
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| Protein GI | 160899613 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0837304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGA AAATCCCCAG ACCGAAGCCG ACCGCGCCGA AGCTGGCCGC ATCCGATGCT
GACGACGACG AGCAGCCGGA CGGCTGGCAA CGCCACGTCG AGGCACTGCG CCAGGCCGGC
ATCCCCGAAC CCGGCACGGC GGTGCAAGGC CGCAGGCCGG CGACCCTGGC AGACGAGCAG
GCGCTGTACG AGGTCGCGCC GTCGTTCGTG GAACTGCTGC CCTGGGTGGA GTTCCTGGCG
CAGTCGAAAG CCATGTTGCT GGAGGACGGG CAATCGGTGG CGGCGTTCTA CGAGCTGGTG
CCGCTGGGCA CCGAAGGCCG GGAACCTGGC TGGCTCGCGC AGGCCCGCGA TGCCTTGGAA
AACGCGCTGC AGGACAGTTT CGATGAACTG GATGAGAACC CCTGGGTGCT GCAGCTCTAC
GCTCAGGACG AGCCCAGTTT CGACCAGTAC ATGCAGACCC TGCGCGACTA TGTGCAGCCG
CGCGCCCGTG AGACGGCGTT CACCGAGTTC TACCTGCGCT TCTTCGGCCA TCACCTGCGC
GCGGTGGCCA AGCCGGGCGG TCTGTTCGAG GACACGGTGG TCACACGGCT GCGCTGGCGC
GGCCAGACCC GGCGTGTGCG CATGGTGGTC TATCGCCGCG TGACCGGCCA AGGGCAAAAC
AGCCGCCGCG GGCAGACGCC CGAGCAGATG CTCAATATCG TTTGCGACCG CCTGTGCGGC
GGACTGGCGA ACGCCGGCAT TCAGGCCCGG CGCATGGTGG CTGCGGATGT TCACGACTGG
CTGCTGCGCT GGTTCAACCC GCGTCCCACG TTGCTTGGGC CTGGGGCCGA AGACAGGGAG
CGCTTCTATG CGCTGGCGCG CTACCCCGAC AGTACGGAGG CCGGCGAAGA CGGCGAGATC
GAATTGGCGA GCGGGCGGGA TTTCAGCCAG CGGCTGTTCT TCGGCCAGCC GCGCTCCGAC
GTGGCGCAGG GCACCTGGCA TTTCGACGGC CTGCCGCACC GCGTGCTGAT CACCGACCGC
CTGCGCATGC CGCCGGGCAC AGGGCACCTG ACCGGCGAGA CACGCAAAGG CGATGCCATC
AACACGCTGT TCGACCAGAT GCCCGAGGAC ACCACCCTTT GCCTGACGAT GGTCGCCACG
CCGCAGGATG TCCTTGAGGC GGACTTGAAC CACCTGGCCA AGAAAGCGGT CGGCGAAACC
CTGGCGTCGG AGCAGACGCT CAAGGACGTG CATGAAGCCC GTTCCCTGAT CGGCAGCGCG
CACAAGCTCT ATCGCGGCAC GCTGGCGTTC TACCTGCGCG GGCGCGATGA GGCGGAACTG
GACCGACGCG GCCTGGATCT GGCGAACGTC ATGCTCAACG CTGGCCTGCA GCCGGTGCGC
GAGGACGACG AGGTGGCACC GCTCAACAGC TACCTGCGCT GGCTGCCGTG CTGCTACAAC
CCCGGCCAGG ATCGGCGCAA GTGGTACACC CAACTGATGT TCGCCCAGCA CGCGGCGAAC
CTCTCGCCGG TGTGGGGCCG CGCCCAGGGT ACGGGGCACC CCGGCATCAC GATGTTCAAC
CGCGGCGGCG GGCCGATCAC CTTCGACCCG CTCAACCGCC TGGACCGGCA GATGAACGCC
CACCTGTTCC TGTTCGGCCC GACGGGTTCG GGCAAGTCGG CGACCCTCAA CAACCTCTTG
AATCAGGTCA CGGCGATCTA CCGACCCCGC CTGTTCATTG TCGAGGCCGG CAACAGCTTT
GGCTTGTTCA GCGACTTTGC CCGGCGCCTG GGCCTGACCG TGAACCGGGT CAAGCTCGCG
CCGGGCTCGG GCGTTACCCT GGCGCCGTTC GCGGATGCGC GCCGGCTGAT CGAGACGCCC
AGCGACGTGC AGACGCTCGA CGCCGATGCC CTGGACGAAG ACCTGCCGCC CGATGCTGTG
GCCATGGAGG CAGATGAGCA GCGCGACGTA CTGGGCGAAT TGGAGATCAC CGCGAGGCTG
ATGATCACCG GTGGCGAAGA CAAGGAAGAA GCCCGGATGA CGCGGGCCGA CCGCTCGCTG
ATCCGTCAGT GCATCCTCGA TGCCGCAGAA CACTGCCACA GCAAGGATGG CGAGAAGCGC
ACCGTGCTCA CGCGCGATGT GCGCAATGCG CTGCGCACGC GCAGCCAGGA CCCGACGCTG
CCGGAAATGC GGCGTGTGCG ACTGCTGGAG ATGGCCGACG CCATGGACAT GTTCTGCCAA
GGCACGGACG GTGAAATGTT CGACCGCGAC GGTTCGCCGT GGCCCGAGGC CGACATCACC
CTGGTCGATC TGGCGACCTA TGCCCGCGAG GGCTACAACG CGCAGCTCTC CATTGCCTAC
ATAAGCCTGA TCAGCACGGT GAACAACATT GCCGAGCGCG ATCAGTACCT GGGCCGCCCG
ATCATCAACG TCACCGACGA AGGGCACATC ATCACCAAGA ACCCGCTGCT CGCCCCCTAC
GTGGTGAAGA TCACCAAGAT GTGGCGCAAG CTGGGGGCCT GGTTCTGGCT CGCCACACAA
AACATCGACG ATCTGCCGCG CGCCGCAGAG CCCATGCTCA ACATGATCGA GTGGTGGATC
TGCCTGTCGA TGCCACCCGA TGAGGTGGAG AAGATCGCCC GCTTCCGCGA ACTCTCGCCT
GCGCAGAAGG CGCTGATGCT TTCGGCGCGC AAGGAAGCCG GGAAGTTCAC CGAGGGCGTC
ATCCTCTCCA AGAGCCTGGA AGTGCTGTTT CGGGCCGTGC CACCGAGCCT CTATCTCGCG
CTTGCGCAGA CCGAACCCGA GGAGAAAGCC GAGCGTTACC AACTCATGCA ACAGCACGGC
ATCAGTGAAC TCGACGCGGC CTTCAAGGTG GCCGAGAAGA TCGACCAGGC GCGCGGCATC
GAGTCGCCGG CCTTGGGCCT GCCGCAATAG
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| Protein sequence | MRWKIPRPKP TAPKLAASDA DDDEQPDGWQ RHVEALRQAG IPEPGTAVQG RRPATLADEQ
ALYEVAPSFV ELLPWVEFLA QSKAMLLEDG QSVAAFYELV PLGTEGREPG WLAQARDALE
NALQDSFDEL DENPWVLQLY AQDEPSFDQY MQTLRDYVQP RARETAFTEF YLRFFGHHLR
AVAKPGGLFE DTVVTRLRWR GQTRRVRMVV YRRVTGQGQN SRRGQTPEQM LNIVCDRLCG
GLANAGIQAR RMVAADVHDW LLRWFNPRPT LLGPGAEDRE RFYALARYPD STEAGEDGEI
ELASGRDFSQ RLFFGQPRSD VAQGTWHFDG LPHRVLITDR LRMPPGTGHL TGETRKGDAI
NTLFDQMPED TTLCLTMVAT PQDVLEADLN HLAKKAVGET LASEQTLKDV HEARSLIGSA
HKLYRGTLAF YLRGRDEAEL DRRGLDLANV MLNAGLQPVR EDDEVAPLNS YLRWLPCCYN
PGQDRRKWYT QLMFAQHAAN LSPVWGRAQG TGHPGITMFN RGGGPITFDP LNRLDRQMNA
HLFLFGPTGS GKSATLNNLL NQVTAIYRPR LFIVEAGNSF GLFSDFARRL GLTVNRVKLA
PGSGVTLAPF ADARRLIETP SDVQTLDADA LDEDLPPDAV AMEADEQRDV LGELEITARL
MITGGEDKEE ARMTRADRSL IRQCILDAAE HCHSKDGEKR TVLTRDVRNA LRTRSQDPTL
PEMRRVRLLE MADAMDMFCQ GTDGEMFDRD GSPWPEADIT LVDLATYARE GYNAQLSIAY
ISLISTVNNI AERDQYLGRP IINVTDEGHI ITKNPLLAPY VVKITKMWRK LGAWFWLATQ
NIDDLPRAAE PMLNMIEWWI CLSMPPDEVE KIARFRELSP AQKALMLSAR KEAGKFTEGV
ILSKSLEVLF RAVPPSLYLA LAQTEPEEKA ERYQLMQQHG ISELDAAFKV AEKIDQARGI
ESPALGLPQ
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