Gene Daci_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4170 
Symbol 
ID5749758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4562979 
End bp4563740 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content65% 
IMG OID641299273 
Producthypothetical protein 
Protein accessionYP_001565186 
Protein GI160899604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.05325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.977781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CCGCCTCGAC TGCGCAGCGC GAGCAGAACC GCCGCCAGGG CTTGATCGTC 
GGCACCATCA CCTTGCCGCT CCGGCTGCTC GGGGTGCTGG TCGGCTCGCT GCTGTTCTCG
ATCCTGATGG AGTGCATCGG CATGCACCTG TTCTGGAAAG ACCAGGGCTG GCAGCACTCC
CAGCAAATGT TGCAGTACGA GCTGGGGCAC CTGTCCAAGC ATTTCACGCG CAGCGTGGTC
GTGCAGGAGC CGGGGCGAAC GGCGCACGAG CTGGTGGACA CGGGTTATGA ATGGGTGTTC
GTGCGATCAG GGCTCCTGGA GCGCATGAGC CAGACCGCCG AGCGCGCCCG CGCGCCCAGC
CAGGGGAAAA ACCAGGACGG AGGGCGCAAC TTCCGCTACT TCATCAGCCA GGTCTATGTC
TGGACGGAGA GCTACCTGAT CGCCGCAGCC TTCACGACGC TTACTTTCCT CGTGCGCCTG
CTGGTCCTGG CGCTCACGCT GCCGCTGATC TTCACGGCCG CTTTCGTCGG CCTGATCGAC
GGTTTGGTAC GGCGGGATGT GCGCCGGTTC GGCGCAGGCC GGGAATCCGG CTTTATCTAT
CACCGAGCGA AAGCGAGCCT GATGCCGCTG GCCGTGCTGC CCTGGGTCAC GTACCTGGCG
CTGCCGATCT CGGTGCATCC GCTGCTGATC CTGCTGCCCA GCGCCGGCTT GCTGGGGCTG
GCCGTGAGCC TGACTGCAGG GAGCTTCAAG AAGTACCTCT AG
 
Protein sequence
MSDAASTAQR EQNRRQGLIV GTITLPLRLL GVLVGSLLFS ILMECIGMHL FWKDQGWQHS 
QQMLQYELGH LSKHFTRSVV VQEPGRTAHE LVDTGYEWVF VRSGLLERMS QTAERARAPS
QGKNQDGGRN FRYFISQVYV WTESYLIAAA FTTLTFLVRL LVLALTLPLI FTAAFVGLID
GLVRRDVRRF GAGRESGFIY HRAKASLMPL AVLPWVTYLA LPISVHPLLI LLPSAGLLGL
AVSLTAGSFK KYL