Gene Daci_4145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4145 
Symbol 
ID5749733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4538048 
End bp4538608 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID641299248 
Producthypothetical protein 
Protein accessionYP_001565161 
Protein GI160899579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.386904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000515415 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACAG CACACCCACT CAACCAGGCT GTCATCGCCC AGGCCCTCTA TGACCTGCGC 
AATGGGCAAC TGCGCCGCTG CAAGCTGATG GGGTTTGGCG AGGCAGAGCT GGACGCCCTC
AAGCATCCCG CGCTGATCAG CGTGCTGGCC AACGCCAACG TCTCCTGGTG CTCAGTGACG
GTCAACCGCG AAGTGCTGCG GCGGCTGCTC CAGCAGGCGC AGGATGTGGA GAAGGAAATC
GCCACAGTCG ATCGCATGCT CAGGCTGGGC GCGAGCACGG AGATGGTCAG CAAGTTCTAT
GGCTTGACGC ATCAGGAAGT GGCTCTTCGC CGTGAAATCC TTGGTCTGCC CAAACGGAAG
GGTCGGCACC CCGTGCTGGA CGAGGAGCAG GACACGGAGC TGTGGCGGCA ATGGAAGGCC
GTGACCAACA GCAGGACCGT CGATCTCGAA GACGAAACTT CCATCCTCGA TGCCGCCATG
GACTTGGCCG AAGGCATGTC GCTGCCTCTG TCGGTGGTCT GGGCCTCGAT CAAGAGCTGG
GTCGATCAGG GACTGGCTTG A
 
Protein sequence
MSTAHPLNQA VIAQALYDLR NGQLRRCKLM GFGEAELDAL KHPALISVLA NANVSWCSVT 
VNREVLRRLL QQAQDVEKEI ATVDRMLRLG ASTEMVSKFY GLTHQEVALR REILGLPKRK
GRHPVLDEEQ DTELWRQWKA VTNSRTVDLE DETSILDAAM DLAEGMSLPL SVVWASIKSW
VDQGLA