Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4080 |
Symbol | |
ID | 5749667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4486261 |
End bp | 4489635 |
Gene Length | 3375 bp |
Protein Length | 1124 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641299182 |
Product | hypothetical protein |
Protein accession | YP_001565096 |
Protein GI | 160899514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.292091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.032057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA AAGACGGCAA GATCGTCTAT GACGCCCGTG ACCCCGAGTT CCAGGACGAC AACGATAAAT TCCTGGCCGG CTGCCGAATT TACAAGGGTG ATGAGCAGCA ACTGCCCGAC CCAGACCTCG AAGCTATTCA CGGCGCAGGC GAAGTGCCCG CGTATCGCGG AAGCTCATAC ATTGTTTTCA TTGACGACGA TGTGACAGAC CGTCGCGGGT CTATTCCTCA ATACGAGTTC GTTGTTGGTC GTGCTGAGGC AAACCGATTG GGAAATCCCG GGGACCCGAT CCCATCCGAA GGCAGATATG TTGTTCAGGG CACTACTGGG GGAGGCGATC TTGCTTCGGC AAGACTACCC GGTAGTTCTA TGGATACCTC TGTAAATAAC ACGTACTTTA TCGGGTGGTA TGTTGAGCCA ACATTTGGGC AGCCGGCTGT TAATGCGACT TTCTATATAG AGATAAACGG CCTAGAGGTC TACAATTTTT CAGGAGATGC TTCTGCAGAT AATAGGCTGT ACCATTGCAT TCAATTTCGA CATCAAAACA GATCCGATAT TTGCGTTGTT GGAATGAGGT GTACTCCTCC TTCTGGAGGG CAATTCCATT TAACATGGCA GGCAATTGAT TCAACAAAGA TATATACACC TGCAAATTCT GCTGATGTAG TTCTGTCAGG CGACCCGCTT TATGGGTTAT TTCTTGATGA AGACGAGAAA TTATTCACGA TGCACATGGA TATCCCTCAG TGCCCGCCGG AATGGTCATG GGGCGCAAAT GTGCTGACTG AAGAGGCTGT CGAGGCTGGC GGGACAACGG TGAAAATTTC TCCAGTGCCA TTGCATGAGA TAGTGACTTC CATCAGTGAG CGCTGCAACG TTGGGCCGGA GAATTACGAC ACGTCCGAGC TTGTTGATAT GGTGGACGGA TTTGTTATGG CCAGTGCTGG CTATAGTGGA GCAGACGCTA TCAATAGCCT GCGGGCGCCG TATTTCTTCG ACTGCCCAGA ATATGGCGGA AAGATCTGGT ATCACAAGCG AGGTAAAGCA TCTGTCGCTG AAATAACCAT GGCTGACATG GTTGAAGAGC CTGACGATAG TGAGCGGCAA GCGCAAATTG AGTATCCGAG GAAGCTGCAC CTGACGTTTC AAAGTGCTGC CGTCAATTAC CAGACAGCGC AAGCAACGAG TGAGCGGGTC TCTCCTGATG TGCGCGTCAC TGGAGAATCG GCGATGCAGG TTGCTGTGGT GATGACCTCG GAGCTTGCCG CACAGAAAGC GGCCATGCTG CACAAAGTGT CCTGGTCCGA GGCAGAGGGC GAGGTCAAAT TCTCGCTGCC GGATTCTTGG CTGCGCCTTG TGCCAGGCGA TTGCGTTGTG CTCAAGCCGC GCGACACGGC GCGGCGCGTG CGCATCGACG GGATCGAAAT GTCGGCTGGG GTGATGCAGA TTACTGGGCA TGTGGACCGC CGCAGCGCTT ATGCATCAAC TGTTGGATAC GTGCCGCTGC CGGAGCCCAC AAAGCCCCCT TCAAGCGTTG TAGGCGACAC CGTGCTGGCC GTGCTGGACG TGCCACTGCT GCGAGATGAC GATGACGCCC TCTACTACTA CGCCGCAGTC ACTGGCGACC GCTCTGCATG GCGCGGCGCC CAGGTGCAAC GCAGCCTGGA TGGCGGAGCA TCCTATGTCG ATGCTCTGGG CATCAGCTTC CCTGCAACGA TGGGCCGGCT GCGCGCCGAA CTGCCCAGTG CGTCCCCCTG GTACACAGAC AGCACAAACG TGATCGACGT GGACCTGATC CGCGACGGCG ACAGCCTGGA CAGCGTGACT GCGGCCCAGT TCCTGCAGCG TGCAGGCGCC GTGGCGCTGC AACTGGCAGA CGGGTCTTGG GAGGTCGCAC AGTACCGCGA TGCAGAGCAT GTCAGTGGCT TGCGCTACCG ACTGAGCACA TTGCATCGGG GGCAGCTCAA TACCGTGCCA GGGGCGCACG CGGCTGGCGC GATGCTGGTG CTGCTTGATG ACGTGAGCCG CATATCTGCG CAATCGGCAT GGCTGAGCCG CGTCTTGACG CATAGAGCTC CAAGTTTTGG CGGAGCCGTG GAGACAGCTA CACCTCAATC CATGACGTAT GCAGGCCGTG CGCAACGTGA GTGGCCTGTT GCATCGCTGC GCATCGCCGC GACTGGTGGC CCGGTGGGCG GCAGCATCGT TGCCAGTTGG GCGCCGCGTC ATCGACTCGG GACAGACATA CTGCCTGTGG CGAGCCAGTA TTTCAGGGGA TTTAGGGTGT ACGCGACCGA TGCTGGTGGG CTGTCAATGA CAGCCGATGT GACGGCTCAG ACGCATACCC TACAACTCGG CGGAATGACA TGGCCAATCC GGGTGCATGT GGCTGCCCTT AATGCGATCA CAGGCGCAGG CCCGTGGCGC TGGGTCAGCA CAGATGGTAC GAGCGGTGAG GGCGATGGAC CGCCTGAGGA GGATCCTGGT GGTGAGACGC CCGTGGGCGA TGGAACGTTC CAGCGCGGCA TTGCGATGTA CGGATCTGCG CGTGCAGGAG CCTATGGGCA GCTCATGGGC GGAGATCTGT TCGCCGCCCA AAACTCTGGC GCATCCTGGC AGTTGTTCAA GCTGCGTGCA GACACTCTGG AAGTGATCAG GGCAGCGTAT GCGGGCCCGT TCCTGTTCAC GGTTATCAAT GACGGCGCGA GCCTATACGG CGGAAGCGAT GGCCTTGTGC GCAAATGGGA TGCTGATCTC AACGAGACAG CCCAGGCTCA AGTCGGGTTC ACTGGAGATG CCCAGGGCCT GGCTCTCTGC GGCGGTAGCC TGTGGGTGTC GGTGCCTTAT GAGCCGGCTG TCAAAAAGCT CAATCCCTCT ACGCTTGCGG TGCAGGCCAC TGTGTCCGGG ATACGCATCA ACAGCCTGGT CACTGATGGG TCATATCTGT ACGGCGCGAG CCGTGCAGAC AACTGCATAT ACAAGCTCGA CGGGTCCACT GGAGCGCTTG TGGCCACGTT CCCCACTGCC GGCTACCCGG CTGATCTTGT GGTCCACGGC GGAAAACTCT GGGTGATCTG CCTTCACGAC CTGCCGGTGC GTCTCTACAA GCACGACGCT GGCACTGGTG CGAAAGAGGC ATTTGAGCTG GAAGTGACAT CGACGCCTGG ACGGCTGGCA ATTACGGGCG ATGTGCTGGG TGTTGGCGGC CGCGTGAGCT TCGCCGTCAA CACGCTCACG GATTCCGTGA TCGGCAGTTT CTCGATACCG CTGGACAACC CAAATCAGGT GCAGCCGCCC ACTGCATCGC TCATCACGCC CACGCGCTTT GTCGCGGGGG GATTTGACTG GACTGCTTAC TACGACTTGA TATGA
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Protein sequence | MAKKDGKIVY DARDPEFQDD NDKFLAGCRI YKGDEQQLPD PDLEAIHGAG EVPAYRGSSY IVFIDDDVTD RRGSIPQYEF VVGRAEANRL GNPGDPIPSE GRYVVQGTTG GGDLASARLP GSSMDTSVNN TYFIGWYVEP TFGQPAVNAT FYIEINGLEV YNFSGDASAD NRLYHCIQFR HQNRSDICVV GMRCTPPSGG QFHLTWQAID STKIYTPANS ADVVLSGDPL YGLFLDEDEK LFTMHMDIPQ CPPEWSWGAN VLTEEAVEAG GTTVKISPVP LHEIVTSISE RCNVGPENYD TSELVDMVDG FVMASAGYSG ADAINSLRAP YFFDCPEYGG KIWYHKRGKA SVAEITMADM VEEPDDSERQ AQIEYPRKLH LTFQSAAVNY QTAQATSERV SPDVRVTGES AMQVAVVMTS ELAAQKAAML HKVSWSEAEG EVKFSLPDSW LRLVPGDCVV LKPRDTARRV RIDGIEMSAG VMQITGHVDR RSAYASTVGY VPLPEPTKPP SSVVGDTVLA VLDVPLLRDD DDALYYYAAV TGDRSAWRGA QVQRSLDGGA SYVDALGISF PATMGRLRAE LPSASPWYTD STNVIDVDLI RDGDSLDSVT AAQFLQRAGA VALQLADGSW EVAQYRDAEH VSGLRYRLST LHRGQLNTVP GAHAAGAMLV LLDDVSRISA QSAWLSRVLT HRAPSFGGAV ETATPQSMTY AGRAQREWPV ASLRIAATGG PVGGSIVASW APRHRLGTDI LPVASQYFRG FRVYATDAGG LSMTADVTAQ THTLQLGGMT WPIRVHVAAL NAITGAGPWR WVSTDGTSGE GDGPPEEDPG GETPVGDGTF QRGIAMYGSA RAGAYGQLMG GDLFAAQNSG ASWQLFKLRA DTLEVIRAAY AGPFLFTVIN DGASLYGGSD GLVRKWDADL NETAQAQVGF TGDAQGLALC GGSLWVSVPY EPAVKKLNPS TLAVQATVSG IRINSLVTDG SYLYGASRAD NCIYKLDGST GALVATFPTA GYPADLVVHG GKLWVICLHD LPVRLYKHDA GTGAKEAFEL EVTSTPGRLA ITGDVLGVGG RVSFAVNTLT DSVIGSFSIP LDNPNQVQPP TASLITPTRF VAGGFDWTAY YDLI
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