Gene Daci_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4073 
Symbol 
ID5749660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4481513 
End bp4482052 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID641299175 
Producthypothetical protein 
Protein accessionYP_001565089 
Protein GI160899507 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.052913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.124399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC GCAGCTCGAA GACTCGGCGG CCCATGACGG CCGACGGTAA GCCCATGTCA 
ACGAACAACG CTCGGCGCGA GACCCTGGCG AAGTCCTGGA CGTTCGCCCC GGCCTGGCGC
GCGGGCCAGC GCTGTCTGAT CCCGGTCGAG TCCTGGGTAG AGCCCTATTG GGGACTTGGC
AGTCGGAATG TCTGGTGGTC GTTCAGGCGC GCGGACGGGC AACCAGCAGC CCTGGCCGGG
CTGTATTCGG AGTGGGTGGA TCCGGCGACT GGCGAGGTCG TGCCGAACTA CACGATGATC
ACCCAGCCGG CGGACGGCCA CCCAGTGCTC GCGCTGATGC ACAGGCCCGG CAAGGAAAAG
CGTGGGGTCG TGATGCTGGA GCCGGGCGAC TGGGATGCAT GGCTGCACGG CACGGCCGCG
CAGGCGGATG AGCTGATCAA GCTGCCGGCC CCGGGCGTTC TGAGATCCGG CGCAGAGAAG
CCGGAGGAAG AGGCTCTGCT GCCGGCCGAG CAGCTGCAGG CGCTGCGTGC GGAAACCTGA
 
Protein sequence
MIPRSSKTRR PMTADGKPMS TNNARRETLA KSWTFAPAWR AGQRCLIPVE SWVEPYWGLG 
SRNVWWSFRR ADGQPAALAG LYSEWVDPAT GEVVPNYTMI TQPADGHPVL ALMHRPGKEK
RGVVMLEPGD WDAWLHGTAA QADELIKLPA PGVLRSGAEK PEEEALLPAE QLQALRAET