| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4051 |
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| Symbol | |
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| ID | 5749638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4457627 |
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| End bp | 4458697 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299153 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001565067 |
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| Protein GI | 160899485 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0769882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0972661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCCG CTGAGCCGGT CGCGCCCTCT TCCAATACAA GGCCTCGCAT GCAGCCATTG
CTACAGAATC TGGTCGAGAT GACGGCCCAC AGGGACCATC TGCGATTGGA AATCTCGGTG
CTGTCCACCC TGTTCAAGCT CAATGGCGTG GTGCAGGTGC GGGCGCTGGA GCTGTTCGCC
ATGCCCGACG GCAGGCACTG CGTGCGTGCG CGCACCTGGA GCCAGGGCGA TCAGGTCATG
TCCACCGATG CCGAGGCCCT GTATGACCCG CAAAGCGTGG AGCTGGCCTC CATGCCCGCG
CTGCAGCAGG CGCTGCAGCA GCGCGCCCTC ATCGCCTCGG CCGTGCAGCC CGATGGCCAG
CACGTGCTGT GGCTGCCGCT GTGGCGCCAG GAGACGGCCT ACCACTGCCT GGAGATCACG
CAGTCCACGG CCTTCTCGCC CAGCCGGCTC GATGTGATCC AGGGCATCTT CGGCGTCTAT
CACAACTACC AGAGCCTGCT GGACTACAGC GAACGCGATG CGCTGACCGG CCTGCTCAAC
CGCAAGACCT TCGACGAGCA GTTCCTGCGC CTGTCGCTGC AGGAGGCGCC GATGGCCATG
CCGGGCGTGG CCACGGAAGA CGTTCCCGGC CAGTGGCTGG CCGCCATCGA CATCGACCAT
TTCAAGCGCA TCAACGACCG CTTTGGCCAC CTGTATGGCG ACGAGGTGCT GATCCTGGTG
GCCAACATCC TGCGCAGCTG CTTCGACGCC AAGGACCGTG TGTTCCGCTT CGGCGGCGAG
GAATTCGTGG TGCTGCTGCG CTCGGTCAGC CTGGTCAATG CCCGCAAGGC GCTGGAGCGC
CTGCGCCACG ACGTGGAGAG CTACGAGTTC CCCCAGGTCG GCCGCATCAC CGTGAGCACG
GGCTTTGCCG CCATGGGCAC GGGCGCACCC GTGGAGGTGC TGGGCCATGC CGACCAGGCC
CTCTACCACG CCAAGGAGCA TGGCCGCAAC CAGACCTGGT ACTACGGTGA TCTGATCACC
CAGGGGCTGC TGGCCCCCCA GGTGAACAGC AACGATATCG AACTGTTCTG A
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| Protein sequence | MSAAEPVAPS SNTRPRMQPL LQNLVEMTAH RDHLRLEISV LSTLFKLNGV VQVRALELFA
MPDGRHCVRA RTWSQGDQVM STDAEALYDP QSVELASMPA LQQALQQRAL IASAVQPDGQ
HVLWLPLWRQ ETAYHCLEIT QSTAFSPSRL DVIQGIFGVY HNYQSLLDYS ERDALTGLLN
RKTFDEQFLR LSLQEAPMAM PGVATEDVPG QWLAAIDIDH FKRINDRFGH LYGDEVLILV
ANILRSCFDA KDRVFRFGGE EFVVLLRSVS LVNARKALER LRHDVESYEF PQVGRITVST
GFAAMGTGAP VEVLGHADQA LYHAKEHGRN QTWYYGDLIT QGLLAPQVNS NDIELF
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